10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
In the below I am trying to rename the contents within each data subfolder in a specific run, based on a partial match of the IonCode_0000_ in each file in the data subdirectory to $1 in f1. There will be multiple runs in f1 but each run in $uniq is unique and will be found in f1 and the rename... (27 Replies)
Discussion started by: cmccabe
27 Replies
2. Shell Programming and Scripting
In the portion of bash below I am using rename to match the $id variable to $file and when a match (there will alwsys be one) is found then the $id is removed from each bam and bam.bai in $file and _test is added to thee file name before the extension. Each of the variables is set correctly but... (3 Replies)
Discussion started by: cmccabe
3 Replies
3. Shell Programming and Scripting
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Discussion started by: cmccabe
1 Replies
4. Shell Programming and Scripting
Im using the command below , but thats not the output that i want. it only prints the odd and even numbers.
awk '{if(NR%2){print $0 > "1"}else{print $0 > "2"}}'
Im hoping for something like this
file1:
Text hi this is just a test
text1 text2 text3 text4 text5 text6
Text hi... (2 Replies)
Discussion started by: invinzin21
2 Replies
5. Shell Programming and Scripting
Help needed urgently please.
I have a large file - a few hundred thousand lines.
Sample
CP START ACCOUNT
1234556
name 1
CP END ACCOUNT
CP START ACCOUNT
2224444
name 1
CP END ACCOUNT
CP START ACCOUNT
333344444
name 1
CP END ACCOUNT
I need to split this file each time "CP START... (7 Replies)
Discussion started by: frustrated1
7 Replies
6. Shell Programming and Scripting
Hi all,
I do not have programming experience and mostly use one-liner or sometimes more to get the job done. I am having problem to batch rename the files that do not match a particular pattern.
Sample file-names from directory:
Meeting_Packages.pdf 13_textfile0 19_textfile0 ... (3 Replies)
Discussion started by: atulkakrana
3 Replies
7. Shell Programming and Scripting
Hi, I have 2 files that I have modified to basically match each other, however I want to determine what (if any) line in file 1 does not exist in file 2. I need to match column $1 and $2 as a single string in file1 to $1 and $2 in file2 as these two columns create a match.
I'm stuck in an AWK... (9 Replies)
Discussion started by: right_coaster
9 Replies
8. Shell Programming and Scripting
Hello all
I am trying to do a script that would allow me to mass rename files after a grep search within them. They are XML files and the pattern I would like to append to the file name is easy to find (e.g. <filename>foo</filename>), but I can't for the life of me find out how to do it and... (2 Replies)
Discussion started by: aavv
2 Replies
9. UNIX for Dummies Questions & Answers
I need to list the files that do not match the search pattern:
Example:
cat file1
This is how it should work
cat file2
This is why I like Unix
grep -option? Unix * (or some other command)
returns file1 (7 Replies)
Discussion started by: olapxpert
7 Replies
10. IP Networking
I need to list the files that do not match the search pattern:
Example:
cat file1
This is how it should work
cat file2
This is why I like Unix
grep -option? Unix * (or some other command)
returns file1 (1 Reply)
Discussion started by: olapxpert
1 Replies
