awk split and awk calculation in the same command


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting awk split and awk calculation in the same command
# 8  
Old 05-19-2016
Works for me as well with your attached input file; result is exactly equivalent to your correct output in post#5. The appended calculated list has 1387 entries like
Code:
.
.
.
EMX1 20 10800
DYNC1H1 7 756
TPRN 673 1093315
SSPN 42 12558
PCDHA1;PCDHA10;PCDHA11;PCDHA12;PCDHA13;PCDHA2;PCDHA3;PCDHA4;PCDHA5;PCDHA6;PCDHA7;PCDHA8;PCDHA9;PCDHAC1;PCDHAC2 3 993
NR2F1 183 88389
FOXO1 180 117000
EVC2 26 8970
.
.
.

So - what exactly don't you like?
# 9  
Old 05-19-2016
What I call the split is:

Code:
.
.
.
chr17 67160204 67160305 chr17:67160204-67160305 ABCA10

and the calculation using the fields in the split

Code:
ABCA10 14 1414

Can the split portion be put in another file so that all that is outputted in the calculation? Thank you Smilie.
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. UNIX for Beginners Questions & Answers

awk command to split pipe delimited file

Hello, I need to split a pipe de-limited file based on the COLUMN 7 value . If the column value changes I need to split the file Source File Payment|ID|DATE|TIME|CONTROLNUMBER|NUMBER|NAME|INDICATOR 42156974|1137937|10/1/2018|104440|4232|2054391|CARE|1... (9 Replies)
Discussion started by: rosebud123
9 Replies

2. Shell Programming and Scripting

awk calculation with zero as N/A

In the below awk, I am trying to calculate percent for a given id. It is very close the problem is when the # being used in the calculation is zero. I am not sure how to code this condition into the awk as it happens frequently. The portion in italics was an attempt but that lead to an error. Thank... (13 Replies)
Discussion started by: cmccabe
13 Replies

3. Shell Programming and Scripting

awk split command to get the desired result

Dear all, I am using the awk 'split' command to get the particular value. FILE=InputFile_009_0.txt Temp=$(echo $FILE | awk '{split($FILE, a, "e_"); print a}') I would like to have the Temp take the value as : _009_0 ... (4 Replies)
Discussion started by: emily
4 Replies

4. Shell Programming and Scripting

Want to split awk command

Hi, There is an awk command in script and it is running successfully. I want to split that command in 2 lines. I have tried using '\' but its not working.. Please suggest me the solution. (11 Replies)
Discussion started by: Sanket Dalvi
11 Replies

5. Shell Programming and Scripting

awk to split one field and print the last two fields within the split part.

Hello; I have a file consists of 4 columns separated by tab. The problem is the third fields. Some of the them are very long but can be split by the vertical bar "|". Also some of them do not contain the string "UniProt", but I could ignore it at this moment, and sort the file afterwards. Here is... (5 Replies)
Discussion started by: yifangt
5 Replies

6. Shell Programming and Scripting

Split a file using awk command.

awk 'FNR == 1 { c = 1 } { print > (f c) } !FNR%n { close(f c); ++c }' n=$files_per_stream f=$input_path/filename_ $input_file $input_file with some records are splitted into files named filename_1,filename_2...etc according to $files_per_stream. Plz help me know how and if anyone has... (7 Replies)
Discussion started by: guptam
7 Replies

7. Shell Programming and Scripting

using awk in perl with split command

Hi, I have an array with following data. First field shows the owner and second is unique name. Now i have to pic the latest value with respect to the date in case of duplicate. like "def" is from two owners "rahul/vineet", now i want the latest from the two and the owner name also for all the... (9 Replies)
Discussion started by: vineet.dhingra
9 Replies

8. Shell Programming and Scripting

Awk command to split file name

Hi I have few files with format access.2Nov-12:15AM. These files will be generated daily . I need to write a script so that if today's date is less than 10 then it has to zip the file and rename it to acess.02Nov-12:15AM.gz .please help me in this . Also please help me in splitting the file... (10 Replies)
Discussion started by: mskalyani9
10 Replies

9. Shell Programming and Scripting

awk calculation

Hallo all, I have a script which creates an output ... see below: root@a7germ:/tmp/pax > cat 20061117.txt 523.047 521.273 521.034 517.367 516.553 517.793 513.114 513.940 I would like to use awk to calculate the (a)total sum of the numbers (b) The average of the numbers. Please... (4 Replies)
Discussion started by: kekanap
4 Replies

10. Shell Programming and Scripting

awk command to split in to 2 files

Hi, I have a problem in grepping a file for 2 strings and writing them to 2 appropriate files. I need to use the awk command and read the file only once and write to the appropriate file. My file is very huge in size and it is taking a long time using cat command and grep command. Can anyone... (3 Replies)
Discussion started by: m_subra_mani
3 Replies
Login or Register to Ask a Question