Text match in two files


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting Text match in two files
# 8  
Old 02-07-2015
Quote:
Originally Posted by cmccabe
I get the below error:

Code:
 awk 'NR==FNR{c[$0]; next} ($0 in c) {print >"match.txt"; next}    {print > "missing.txt"' RS="," flugent.txt RS="\n" IDT.txt
awk: cmd. line:1: NR==FNR{c[$0]; next} ($0 in c) {print >"match.txt"; next}    {print > "missing.txt"
awk: cmd. line:1:                                                                                    ^ unexpected newline or end of string

Thank you Smilie.

---------- Post updated at 01:15 PM ---------- Previous update was at 01:14 PM ----------

Never mind I forgot I removed some files (IDT.txt and flugent.txt)
Hello cmccabe,

Adding a brace to RudiC's code as follows it should work.
Code:
awk 'NR==FNR{c[$0]; next} ($0 in c) {print >"match.txt"; next}    {print > "missing.txt"}' RS="," flugent.txt RS="\n" IDT.txt


Thanks,
R. Singh
# 9  
Old 02-07-2015
Thank you Smilie.
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. UNIX for Beginners Questions & Answers

Data match 2 files based on first 2 columns matching only and join if match

Hi, i have 2 files , the data i need to match is in masterfile and i need to pull out column 3 from master if column 1 and 2 match and output entire row to new file I have tried with join and awk and i keep getting blank outputs or same file is there an easier way than what i am... (4 Replies)
Discussion started by: axis88
4 Replies

2. Shell Programming and Scripting

Match text to lines in a file, iterate backwards until text or text substring matches, print to file

hi all, trying this using shell/bash with sed/awk/grep I have two files, one containing one column, the other containing multiple columns (comma delimited). file1.txt abc12345 def12345 ghi54321 ... file2.txt abc1,text1,texta abc,text2,textb def123,text3,textc gh,text4,textd... (6 Replies)
Discussion started by: shogun1970
6 Replies

3. Shell Programming and Scripting

Bash to add portion of text to files in directory using numerical match

In the below bash I am trying to rename eachof the 3 text files in /home/cmccabe/Desktop/percent by matching the numerical portion of each file to lines 3,4, or 5 in /home/cmccabe/Desktop/analysis.txt. There will always be a match between the files. When a match is found each text file in... (2 Replies)
Discussion started by: cmccabe
2 Replies

4. Shell Programming and Scripting

awk to match field between two files and use conditions on match

I am trying to look for $2 of file1 (skipping the header) in $2 of file2 (skipping the header) and if they match and the value in $10 is > 30 and $11 is > 49, then print the line from file1 to a output file. If no match is foung the line is not printed. Both the input and output are tab-delimited.... (3 Replies)
Discussion started by: cmccabe
3 Replies

5. Shell Programming and Scripting

Display match or no match and write a text file to a directory

The below bash connects to a site, downloads a file, searches that file based of user input - could be multiple (all that seems to work). What I am not able to figure out is how to display on the screen match found or no match found" and write a file to a directory (C:\Users\cmccabe\Desktop\wget)... (4 Replies)
Discussion started by: cmccabe
4 Replies

6. UNIX for Dummies Questions & Answers

Search String, Out matched text and input text for no match.

I need to search a string for some specific text which is no big deal using grep. My problem is when the search fails to find the text. I need to add text like "na" when my search does not match. I have tried this command but it does not work when I put the command in a loop in a bash script: ... (12 Replies)
Discussion started by: jojojmac5
12 Replies

7. UNIX for Dummies Questions & Answers

Match values/IDs from column and text files

Hello, I am trying to modify 2 files, to yield results in a 3rd file. File-1 is a 8-columned file, separted with tab. 1234:1 xyz1234 blah blah blah blah blah blah 1234:1 xyz1233 blah blah blah blah blah blah 1234:1 abc1234 blah blah blah blah blah blah n/a RRR0000 blah blah blah... (1 Reply)
Discussion started by: ad23
1 Replies

8. UNIX for Dummies Questions & Answers

Comparing two text files by a column and printing values that do not match

I have two text files where the first three columns are exactly the same. I want to compare the fourth column of the text files and if the values are different, print that row into a new output file. How do I go about doing that? File 1: 100 rs3794811 0.01 0.3434 100 rs8066551 0.01... (8 Replies)
Discussion started by: evelibertine
8 Replies

9. Shell Programming and Scripting

match text from two files and write to a third file

Hi all I have two files X.txt and Y.txt. Both file contains same number of sentences. The content of X.txt is The filter described above may be combined. and the content of Y.txt is The filter describ+ed above may be combin+ed. Some of the words are separated with "+"... (2 Replies)
Discussion started by: my_Perl
2 Replies

10. UNIX for Dummies Questions & Answers

Replace text in match files

Hi all, I want to replace text 'DEF' for those files containing text 'ABC'. I can only locate the files containing text 'ABC', but I don't know how to replace the text 'ABC' with 'DEF'. I use the following command to locate the files containing 'ABC' find . -exec grep -l 'ABC'... (1 Reply)
Discussion started by: wilsonchan1000
1 Replies
Login or Register to Ask a Question