10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
I've data like these:
Gene1,Gene2 snp1
Gene3 snp2
Gene4 snp3
I'd like to split line if comma and then print remaining information for the respective gene.
My code:
awk '{
if($1 ~ /,/){
n = split($0, t, ",") (7 Replies)
Discussion started by: genome
7 Replies
2. Shell Programming and Scripting
Hello,
I have a data such as this:
ENSGALG00000000189 329 G A 4 2 0
ENSGALG00000000189 518 T C 5 1 0
ENSGALG00000000189 1104 G A 5 1 0
ENSGALG00000000187 3687 G T 5 1 0
ENSGALG00000000187 4533 A T 4 2 0
ENSGALG00000000233 5811 T C 4 2 0
ENSGALG00000000233 5998 C A 5 1 0
I want to... (3 Replies)
Discussion started by: Homa
3 Replies
3. Shell Programming and Scripting
Hi All,
I have following html code
<TR><TD>9</TD><TD>AR_TVR_TBS </TD><TD>85000</TD><TD>39938</TD><TD>54212</TD><TD>46</TD></TR>
<TR><TD>10</TD><TD>ASCV_SMY_TBS </TD><TD>69880</TD><TD>33316</TD><TD>45698</TD><TD>47</TD></TR>
<TR><TD>11</TD><TD>ARC_TBS ... (9 Replies)
Discussion started by: ckwan
9 Replies
4. Shell Programming and Scripting
Hi everyone,
I got a problem with merging files and hoped one of you would have an idea how to approach this issue. I tried it with awk, but didn't get far. This is what I have:
I got 40 files looking like the ones below. All have three columns but the number of rows differs (20000 to 50000).... (6 Replies)
Discussion started by: TuAd
6 Replies
5. UNIX for Dummies Questions & Answers
Hi All,
I have a file example.csv which looks like this
GrpID,TargetID,Signal,Avg_Num
CSCH74_1_1,2007,61,256
CSCH74_1_1,212007,647,679
CSCH74_1_1,12007,3,32
CSCH74_1_1,207,299,777
I want the output as
GrpID,TragetID,Signal-CSCH74_1_1,Avg_Num
CSCH74_1_1,2007,61,256... (1 Reply)
Discussion started by: Vavad
1 Replies
6. Shell Programming and Scripting
Hi All,
I have a file example.csv which looks like this
GrpID,TargetID,Signal,Avg_Num
CSCH74_1_1,2007,61,256
CSCH74_1_1,212007,647,679
CSCH74_1_1,12007,3,32
CSCH74_1_1,207,299,777
I want the output as
GrpID,TragetID,Signal-CSCH74_1_1,Avg_Num
CSCH74_1_1,2007,61,256... (4 Replies)
Discussion started by: Vavad
4 Replies
7. Shell Programming and Scripting
Hello ,
i have a text file like this :
A123 c12AB c32DD aaaa
B123 23DS 12QW bbbb
C123 2GR 3RG cccccc
i want to remove the numbers from second and third column only.
i tried this :
perl -pe 's///g' file.txt > newfile.txt
but it will remove the number from... (7 Replies)
Discussion started by: shelladdict
7 Replies
8. Shell Programming and Scripting
I need to add "new lines" of text with special characters, to specific lines in the file. There are 3 modifications needed. Been testing 2 here without success.
#!/usr/bin/perl
use FileHandle;
$file=FileHandle->new;
$FILENAME="/opt/etc/usr/file.txt";
$file->open ("<$FILENAME") or die... (13 Replies)
Discussion started by: A4ron4perl
13 Replies
9. Shell Programming and Scripting
I used following to add * at the end of the line in file1.
It adds * at the end but has a space before it for some lines but some other lines it adds exactly after the last character.
How do I take out the space ?
sed 's/$/*/' file1 > file2
example:
contents of file1 :
... (2 Replies)
Discussion started by: pitagi
2 Replies
10. Shell Programming and Scripting
Hi ,
i export the crontab in a file (i've no root right) and i would add lines from a file at a special place and rewrite the output in an another file.
the special place is as this :
45 04 * * * /home/toto.sh > /dev/null 2>&1
#
so i would search for toto.sh and insert the lines , the... (5 Replies)
Discussion started by: Nicol
5 Replies