10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
input
"A","B","C,D","E","F"
"S","T","U,V","W","X"
"AA","BB","CC,DD","EEEE","FFF"
required output:
"A","B","C,D","C,D","F"
"S", T","U,V","U,V","X"
"AA","BB","CC,DD","CC,DD","FFF"
tried using awk but double quotes not preserving for every field. any help to solve this is much... (5 Replies)
Discussion started by: khblts
5 Replies
2. Linux
I have file that looks like this,
DIP-17571N|refseq:NP_651151 DIP-17460N|refseq:NP_511165|uniprotkb:P45890 DIP-17571N|refseq:NP_651151
DIP-19241N|refseq:NP_524261 DIP-19241N|refseq:NP_524261 DIP-17151N|refseq:NP_524316|uniprotkb:O16797
DIP-19588N|refseq:NP_731165 ... (2 Replies)
Discussion started by: Syeda Sumayya
2 Replies
3. Shell Programming and Scripting
I have a file which looks like this:
1 3 5 5 3 2
1 5 3 6 3 2
0 5 6 3 2 9
0 4 5 6 4 9
In the first column, instead of 1, I want to place +1 and instead of 0, I want -1 to be put. So the generated file should look like this:
+1 3 5 5 3 2
+1 5 3 6 3 2
-1 5 6 3 2 9
-1 4 5 6 4 9
Just to... (9 Replies)
Discussion started by: shoaibjameel123
9 Replies
4. UNIX for Dummies Questions & Answers
Hi, I have a file with +/- 13000 lines and 4 column. I need to search the 3rd column for a word that begins with "SAP-" and move/skip it to the next column (4th). Because the 3rd column need to stay empty.
Thanks in advance.:)
89653 36891 OTR-60 SAP-2
89653 36892 OTR-10 SAP-2... (2 Replies)
Discussion started by: AK47
2 Replies
5. Shell Programming and Scripting
Hi,
I have the following file,
chr1 100 200 20
chr1 201 300 22
chr1 220 345 23
chr1 230 456 33.5
chr1 243 567 90
chr1 345 600 20
chr1 430 619 21.78
chr1 870 910 112.3
chr1 914 920 12
chr1 930 999 13
My output would be
peak1 20 22 23 33.5 90
peak2 20 21.78 112.3 12 13
Here the... (3 Replies)
Discussion started by: jacobs.smith
3 Replies
6. UNIX for Dummies Questions & Answers
Hi,
I am using the following code to change NA to X in only the 5th column of my text file:
awk '{gsub("NA","x",$5)}1' in.file > out.file
How can I modify this code if I want to change NA to X in multiple columns of the text file (i.e. columns 5,6 and 7). Thanks! (2 Replies)
Discussion started by: evelibertine
2 Replies
7. UNIX for Dummies Questions & Answers
Hi,
I have a tab delimited text file with two columns where the second column takes on values between 1 and 6 (including). If the value of the second column, includes 1,2,3 I want to replace it with LOW. If it is 4,5,6 I want to replace it with HIGH. How do I go about doing that? Thanks
... (3 Replies)
Discussion started by: evelibertine
3 Replies
8. Shell Programming and Scripting
I need to take one column of data and put it into the following format:
1st line,2nd line
3rd line,4th line
5th line,6th line
...
Thanks! (6 Replies)
Discussion started by: batcho
6 Replies
9. Shell Programming and Scripting
Hi, Iam new to unix. I have one input file .
Input file :
ID1~Name1~Place1
ID2~Name2~Place2
ID3~Name3~Place3
I need output such that only first column should change to fixed width column of 15 characters of length.
Output File:
ID1<<12 spaces>>Name1~Place1
ID2<<12... (5 Replies)
Discussion started by: manneni prakash
5 Replies
10. Shell Programming and Scripting
Hi,
Shell script: I would need help on How to extract 3rd line 4th column of a file with single liner
Thanks in advance. (4 Replies)
Discussion started by: krishnamurthig
4 Replies