10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Im really beginner in this case, maybe someone can help me find the answer:
if my input file like this:
void main(int a, int b){
int x; double y;
printf("file");
}
and i want output like this:
int a
int b
int x
double y
A awk script that can parse only data tipe, im confused.
what... (2 Replies)
Discussion started by: radynaraya
2 Replies
2. Shell Programming and Scripting
I have 2 text files where I need to parse data from file 2 using the data from file 1. Below are my sample files
File 1 (tab delimited)
257 350
670 845
725 1025
767 820
...
....
....
file 2 (tab delimited)
220..450 TA AB650 ABCED
520..850 GA AB720 ABCDE
700..1100 TC AB820 ABCDE... (2 Replies)
Discussion started by: Lucky Ali
2 Replies
3. Shell Programming and Scripting
Hi,
I have 2 files
format of file 1 is:
a1
b2
a2
c2
d1
f3
format of file 2 is (tab delimited):
a1 1.2 0.5 0.06 0.7 0.9 1 0.023
a3 0.91 0.007 0.12 0.34 0.45 1 0.7
a2 1.05 2.3 0.25 1 0.9 0.3 0.091
b1 1 5.4 0.3 9.2 0.3 0.2 0.1
b2 3 5 7 0.9 1 9 0 1
b3 0.001 1 2.3 4.6 8.9 10 0 1 0... (10 Replies)
Discussion started by: Lucky Ali
10 Replies
4. Shell Programming and Scripting
Hi All,
I need some help to effectively parse out a subset of results from a big results file.
Below is an example of the text file. Each block that I need to parse starts with "Output of GENE for sequence file 100.fasta" (next block starts with another number). I have given the portion of... (8 Replies)
Discussion started by: Lucky Ali
8 Replies
5. Shell Programming and Scripting
Hi,
I have a folder that contains many (multiple) files
1.fasta
2.fasta
3.fasta
4.fasta
5.fasta
.
.
100's of files
Each such file have data in the following format
for example:
vi 1.fasta
>AB_1 gi|15835212|ref|NP_296971.1| preprotein translocase subunit SecE... (3 Replies)
Discussion started by: Lucky Ali
3 Replies
6. Shell Programming and Scripting
Hi All
I have two files:
file 1
>AB_1
MLKKPIIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFM
IQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRII
RRIKRDMMERGRSLESIIDQYTSVVKPMYHQFIEPSKRYADIVIPEGVSNVVAIDVINSKIASILGEV
>AB_2... (5 Replies)
Discussion started by: Lucky Ali
5 Replies
7. Shell Programming and Scripting
Hi all,
I wud like to get ur assistance in retrieving lines containing l1.My excel dataset contains around 8000 lines.I converted it into a text tab delimiter file and got the lines containing l1,My output is a list of lines containing l1 saved in a outfile.Some of d lines from my outfile s... (5 Replies)
Discussion started by: sayee
5 Replies
8. Shell Programming and Scripting
I have a file that is large and is broken up by groups of data. I want to take certain fields and display them different to make it easier to read. Given input file below:
2008 fl01 LAC 2589 polk doal
xx 2008q1 mx
sect 25698541
Sales 08 Dept group
lead1 ... (8 Replies)
Discussion started by: timj123
8 Replies
9. Shell Programming and Scripting
Hi,
I have file (FILE.tmp) having contents,
FILE.tmp
========
filename=menudata
records=0000000000037
ldbname=pinsys
timestamp=2005/05/14-18:32:33
I want to parse it bring a new file which will look like,
filename records ldbname timestamp... (2 Replies)
Discussion started by: Omkumar
2 Replies
10. Shell Programming and Scripting
Greetings All!!
I have a very peculiar problem where I have to parse a big text file and extract useful data out of it with starting and ending block pattern matching.
e.g. I have a input file like this:
sample data
block1
sample data
start
useful data
end
sample data
block2
sample... (5 Replies)
Discussion started by: arminder
5 Replies
CHECKBASHISMS(1) General Commands Manual CHECKBASHISMS(1)
NAME
checkbashisms - check for bashisms in /bin/sh scripts
SYNOPSIS
checkbashisms script ...
checkbashisms --help|--version
DESCRIPTION
checkbashisms, based on one of the checks from the lintian system, performs basic checks on /bin/sh shell scripts for the possible presence
of bashisms. It takes the names of the shell scripts on the command line, and outputs warnings if possible bashisms are detected.
Note that the definition of a bashism in this context roughly equates to "a shell feature that is not required to be supported by POSIX";
this means that some issues flagged may be permitted under optional sections of POSIX, such as XSI or User Portability.
In cases where POSIX and Debian Policy disagree, checkbashisms by default allows extensions permitted by Policy but may also provide
options for stricter checking.
OPTIONS
--help, -h
Show a summary of options.
--newline, -n
Check for "echo -n" usage (non POSIX but required by Debian Policy 10.4.)
--posix, -p
Check for issues which are non POSIX but required to be supported by Debian Policy 10.4 (implies -n).
--force, -f
Force each script to be checked, even if it would normally not be (for instance, it has a bash or non POSIX shell shebang or appears
to be a shell wrapper).
--extra, -x
Highlight lines which, whilst they do not contain bashisms, may be useful in determining whether a particular issue is a false posi-
tive which may be ignored. For example, the use of "$BASH_ENV" may be preceded by checking whether "$BASH" is set.
--version, -v
Show version and copyright information.
EXIT VALUES
The exit value will be 0 if no possible bashisms or other problems were detected. Otherwise it will be the sum of the following error val-
ues:
1 A possible bashism was detected.
2 A file was skipped for some reason, for example, because it was unreadable or not found. The warning message will give details.
SEE ALSO
lintian(1).
AUTHOR
checkbashisms was originally written as a shell script by Yann Dirson <dirson@debian.org> and rewritten in Perl with many more features by
Julian Gilbey <jdg@debian.org>.
DEBIAN Debian Utilities CHECKBASHISMS(1)