Printing from col x to end of line, except last col


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting Printing from col x to end of line, except last col
# 8  
Old 01-07-2013
Well that explains why sed was replacing all instances, since there was only one per line.

I am having trouble with some nested conditionals.

Code:
# if compounds were found for the class
if [ $MOLFILECOUNT -gt 0 ]
  then

#   sort list of class structures
    data_sort_rows_headerName.sh  $SETS'_sort_'*'.txt' \
                                  PASS1.txt  \
                                  SORT1.txt \
                                  '_makesdf_'$SETS'_'$MOLFILECOUNT'_'$DATASOURCE'_'$DATE_CODE'.txt'

# if the output file does not exist, use SORT1 to start the file
   if[ ! -f "$OUTPUFILE" ]
   then
      cp  SORT1.txt  TEMPOUTPUT1
   else
      cat TEMPOUTPUT1  SORT1.txt  > TEMPOUTPUT2
   fi

fi

This code is throwing an exception,

line 111: syntax error near unexpected token `then'
line 111: ` then'

I have highlighted the then that the error is referring to. I know I have used syntax like this before, so I'm not sure what the issue could be.

LMHmedchem
# 9  
Old 01-07-2013
try putting a space after "if":
Code:
if [ ! -f "$OUTPUFILE" ]

Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Matrix to 3 col sorted

Hello experts, I have matrices sorted by position, there are 400k rows, 3000 columns. ID CHR POS M1 M2 M3 M4 M5 ID1 1 1 4.6 2.6 2.1 3.5 4.2 ID2 1 100 3.6 2.9 3.2 2.6 2.5 ID3 1 1000 4.1... (9 Replies)
Discussion started by: senhia83
9 Replies

2. Shell Programming and Scripting

Merge files by col value

Hi, Please help, this is quite complex, I dont know how to start. The original input files are 10mb in size each. I have multiple files and I want to merge them in the following way. Every file has 4 columns. Col1 and col2 are fixed with respect to each other. In the example value A... (2 Replies)
Discussion started by: alpesh
2 Replies

3. Shell Programming and Scripting

Modifying col values based on another col

Hi, Please help with this. I have several excel files (with and .xlsx format) with 10-15 columns each. They all have the same type of data but the columns are not ordered in the same way. Here is a 3 column example. What I want to do add the alphabet from column 2 to column 3, provided... (9 Replies)
Discussion started by: newbie83
9 Replies

4. Shell Programming and Scripting

Retrieving data from 65th col (of each line) ?

Hello Friends, I am in situation where I have to note down few SQL queries from specific hexdump format. Here is an example (the query text starts at 65th character on each line) ---------------------- 0x000007FEB0E701C0 : 7365 6C65 6374 2063 7573 746E 6F2C 2020 select custno, ... (9 Replies)
Discussion started by: Sunusernewbie
9 Replies

5. UNIX for Advanced & Expert Users

Print line based on highest value of col (B) and repetion of values in col (A)

Hello everyone, I am writing a script to process data from the ATP world tour. I have a file which contains: t=540 y=2011 r=1 p=N409 t=540 y=2011 r=2 p=N409 t=540 y=2011 r=3 p=N409 t=540 y=2011 r=4 p=N409 t=520 y=2011 r=1 p=N409 t=520 y=2011 r=2 p=N409 t=520 y=2011 r=3 p=N409 The... (4 Replies)
Discussion started by: imahmoud
4 Replies

6. Shell Programming and Scripting

i can't cut the third col

SW_dist_intr false Enable SW distribution of interrupts True autorestart true Automatically REBOOT OS after a crash True boottype disk N/A False capacity_inc 1.00 ... (7 Replies)
Discussion started by: maxim42
7 Replies

7. Ubuntu

Match col 1 of File 1 with col 1 File 2 and create a 3rd file

Hello, I have a 1.6 GB file that I would like to modify by matching some ids in col1 with the ids in col 1 of file2.txt and save the results into a 3rd file. For example: File 1 has 1411 rows, I ignore how many columns it has (thousands) File 2 has 311 rows, 1 column Would like to... (7 Replies)
Discussion started by: sogi
7 Replies

8. UNIX for Dummies Questions & Answers

Info about col command

Hello every1. Can any1 help me with the col command. Wat is a reverse line feed. Which kind of files u need to use the col command. (2 Replies)
Discussion started by: rahulrathod
2 Replies

9. Shell Programming and Scripting

Setting Col size

I have a variable in a shell script which is more than 80 characters. 1) I log into SQL plus and populate a variable using 3 queries appended by ,' comma'. ORAINFO=`sqlplus -s << ! / as sysdba set feedback off set heading off select LOG_MODE... (2 Replies)
Discussion started by: yerra
2 Replies

10. UNIX for Advanced & Expert Users

Help On col command

Hello Can Any1 tell me the difference between the col command and the col command with the -f option. I tried running both of them but i can't see any difference. Please guide me. (1 Reply)
Discussion started by: rahulrathod
1 Replies
Login or Register to Ask a Question