Field extract w/o - and adding formats


 
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# 8  
Old 08-24-2012
Quote:
Originally Posted by spacebar
This is one way to do it:
Code:
$ cat t
Accession  Orderable  Unique ID  Subject ID  Timepoint  Colletion Date/Time
12-170-0185  Glucose  1756487  1  D-07_H00.03  18-JUN-2012 06:03:00
12-170-0185  Insulin  1756487  1  D-07_H00.03  18-JUN-2012 06:03:00
12-170-0200  Glucose  1756487  1  D-07_H00.05  18-JUN-2012 06:05:00
12-170-0200  Insulin  1756487  1  D-07_H00.05  18-JUN-2012 06:05:00
12-170-0215  Glucose  1756487  1  D-07_H00.15  18-JUN-2012 06:15:00
12-170-0220  Glucose  1759452  3  D-07_H00.15  18-JUN-2012 06:15:00
12-170-0220  Insulin  1759452  3  D-07_H00.15  18-JUN-2012 06:15:00
12-170-0181  Insulin  1751183  4  D-07_H00.03  18-JUN-2012 06:03:00

$ sed -e '1d' -e 's/^\([[:digit:]]\{2\}\)-\([[:digit:]]\{3\}\)-\([[:digit:]]\{4\}\).*/"0000020\1\200\3"/g' t
"000002012170000185"
"000002012170000185"
"000002012170000200"
"000002012170000200"
"000002012170000215"
"000002012170000220"
"000002012170000220"
"000002012170000181"

This works well.


Is there a way to remove the header
HTML Code:
Accession  Orderable  Unique ID  Subject ID  Timepoint  Colletion Date/Time
and blank rows?

Please advise.
# 9  
Old 08-24-2012
@Daniel : Just in case if you missed the answer, please refer to my last post...
# 10  
Old 08-24-2012
Quote:
Originally Posted by msabhi
@Daniel : Just in case if you missed the answer, please refer to my last post...
Yes, that works fantastic! Really appreciate it!
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