10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. Shell Programming and Scripting
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Discussion started by: lxdorney
8 Replies
3. UNIX for Dummies Questions & Answers
Hi,
I have a directory with a lot of files like this:
a.bam
b.bam
c.bam
I like to rename these files based on a list where the name of the files in the first column will be replasced by the names in the second column. Here is my list which is a tab-delimited text file:
a x
b y
c ... (4 Replies)
Discussion started by: a_bahreini
4 Replies
4. Shell Programming and Scripting
Is better way to write the script loop through one by one "Old_File_1: & New_File_1:" to copy 100 files to /staging/test folder then re-name & gzip all those files? I wrote this code below and don't like that much. Thanks
I have a control_file under /tmp/test folder like below 100 files and... (10 Replies)
Discussion started by: dotran
10 Replies
5. Shell Programming and Scripting
I have a sourcefile which contains data as below.I want to check whether datatype,structure and date format looks good as mentioned.
Data is delemited by cydila Ç.
Source file-Emp.txt
snoÇnameÇphonenoÇdeptÇjoineddate
1ÇvivekÇ0861ÇCSEÇ2013-05-29 00:00:00
2ÇdineshÇ123456ÇECEÇ2013-05-29 00:00:00... (8 Replies)
Discussion started by: katakamvivek
8 Replies
6. Shell Programming and Scripting
How can i rename list of files in a directory? (4 Replies)
Discussion started by: knip
4 Replies
7. Shell Programming and Scripting
I am currently writing a script in AIX
I connected to the database using SQL *PLUS
I need to retrive data of Number of rows inserted today in the table(TABLE_NAME) which has column DATETIME(DDMMYYYY)
I tried using
select TO_CHAR(sysdate, 'DDMMYYYY') CHRDATE from dual
select count (*)... (2 Replies)
Discussion started by: PhAnT0M
2 Replies
8. Shell Programming and Scripting
Hi,
I need to do something easy but I can't seem to figure out how to do this.
Let's say I have 6 files in the directory below:
/ebsbeta_f/flash/EBSUATQB/onlinelog
o1_mf_6_55klt7nr_.log
o1_mf_3_55klskj4_.log
o1_mf_4_55klsrl1_.log
o1_mf_5_55klt09p_.log
o1_mf_2_55klv1ts_.log... (10 Replies)
Discussion started by: exm
10 Replies
9. Shell Programming and Scripting
Hi Friend,
I have a small script to list all file FFAAAAABBBBB00001 and FFAAAAABBBBB00001.repaired (when I run another script, the orginal file will output another *.repaired file) in my unix directory, and reaname the output file FFAAAAABBBBB00001.repaired back to FFAAAABBBBB00001. However, it... (2 Replies)
Discussion started by: happyv
2 Replies
10. UNIX for Dummies Questions & Answers
Hi all,
I am a newbie in writng unix..I am using ksh shell..Does anyone know how to copy a list o files from directory A to directory B with differnt names? i.e
in Dir A, I have
RPT101.555.TXT
RPT102.666.TXT
and I want to copy those files to dir B with new naming convention..
in Dir B,... (7 Replies)
Discussion started by: kinmak
7 Replies