10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hello all,
I want to join 2 tabbed files on the first 2 fields, and filling the missing values with 0. The 3rd column in each file is constant for the entire file.
file1
12658699 ST5 XX2720 0 1 0 1
53039541 ST5 XX2720 1 0 1.5 1
file2 ... (6 Replies)
Discussion started by: sheetalk
6 Replies
2. Shell Programming and Scripting
I have a file with two fields in it delimited by a comma. Some of the first fields are duplicates. I am trying to eliminate any duplicate records in the first field, and combine the second fields in the output file.
For example, if the input is:
Jane,group=A
Bob,group=A
Bob,group=D... (3 Replies)
Discussion started by: DJR
3 Replies
3. UNIX for Dummies Questions & Answers
Dear all,
I 'd like to ask a question. I have two datasets: a.txt (only has one filed, call 'SNP'), b.txt( has thousands of fields, 1st field call 'SNP').
a.txt:
rs9527
rs318567
rs12376
...
b.txt:
rs167893 1 2 0 2 1 2 ...
rs318567 2 0 2 1 2 0 ...
rs12376 0 2 0 2 1 2 ...
I... (2 Replies)
Discussion started by: forevertl
2 Replies
4. Shell Programming and Scripting
Hi All,
I am looking for an awk script to do the following
Join the fields together only if the first 4 fields are same.
Can it be done with join function in awk??
a,b,c,d,8,,,
a,b,c,d,,7,,
a,b,c,d,,,9,
a,b,p,e,8,,,
a.b,p,e,,9,,
a,b,p,z,,,,9
a,b,p,z,,8,,
desired output:
... (1 Reply)
Discussion started by: aksijain
1 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
Discussion started by: evelibertine
5 Replies
6. Shell Programming and Scripting
My input is as below:
1|2|3|a02 test|303
2|2|4|1002 a05 ind|303
4|3|5|ind|30
Output
1|2|3|a02test|303
2|2|4|a05ind|303
4|3|5|ind|30
I used command:
I am getting above output. Is there any simple way using awk to acheive this.
Thanks.
Please use code tags! (6 Replies)
Discussion started by: Jairaj
6 Replies
7. UNIX for Dummies Questions & Answers
Hi, I need help with the join command
I have 2 files that I want to join on multiple fields.
I want to return all records from file 1
I also want empty fields in my joined file if there isn't a match in file 2
I have already sorted them so I know they are in the same order.
file1 ... (0 Replies)
Discussion started by: shunter0810
0 Replies
8. UNIX for Dummies Questions & Answers
Hello,
My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns:
File A: (tab-delimited)
PDB CHAIN Start End Fragment
1avq A 171 176 awyfan
1avq A 172 177 wyfany
1c7k A 2 7... (3 Replies)
Discussion started by: InfoSeeker
3 Replies
9. Programming
example sql:
select a.a1,b.b1,c.c1,d.d1,e.e1
from a
left outer join b on a.x=b.x
left outer join c on b.y=c.y
left outer join d on d.z=a.z
inner join a.t=e.t
I know how single outer or inner join works in sql.
But I don't really understand when there are multiple of them.
can... (0 Replies)
Discussion started by: robbiezr
0 Replies
10. Shell Programming and Scripting
I've looked at the join command which is able to perform what I need on two rows with a common field, however if I have more than two rows I need to join all of them.
Thus I have one file with multiple rows to be joined on an index number:
1 randomtext1
2 rtext2
2 rtext3
3 rtext4
3 rtext5... (5 Replies)
Discussion started by: crimper
5 Replies