9 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi All, here's a question from newbie
I have a data like this, which set of small DNA sequences separated by new line
GAATCCGGAAACAGCAACTTCAAANCA
GTNATTCGGGCCAAACTGTCGAA
TTNGGCAACTGTTAGAGCTCATGCGACA
CCTGCTAAACGAGTTCGAGTTGAANGA
TTNCGGAAGTGGTCGCTGGCACGG
ACNTGCATGTACGGAGTGACGAAACCI... (6 Replies)
Discussion started by: amits22
6 Replies
2. Shell Programming and Scripting
I do have a big file in the following format
>A1
ATGCGG
>A2
TCATGC
>A3
-TGCTG
The number of characters will be same under each subheader and only possible characters are A,T,G,C and -
I want to count the number of A's, T's,G's, C's & -'s vertically for all the positions so that I... (5 Replies)
Discussion started by: Lucky Ali
5 Replies
3. Shell Programming and Scripting
I am trying to display the output of ls and also print the number of characters in EVERY file name. This is what I have so far:
#!/bin/sh
for x in `ls`; do
echo The number of characters in x | wc -m
done
Any help appreciated (1 Reply)
Discussion started by: LinuxNubBrah
1 Replies
4. Shell Programming and Scripting
Input:
ghw//yw/hw///??u
How can i count the slashes("/") using sed? (13 Replies)
Discussion started by: cola
13 Replies
5. Shell Programming and Scripting
Hi All,
I need some help in counting the number of letters in a big file with separations.
Following is the file I have
>AB_1
MLKKPIIIGVTGGSGGGKTSVSRAILDSFPNARIAMIQHDSYYKDQSHMSFEERVKTNYDHPLAFDTDFM
IQQLKELLAGRPVDIPIYDYKKHTRSNTTFRQDPQDVIIVEGILVLEDERLRDLMDIKLFVDTDDDIRII... (6 Replies)
Discussion started by: Lucky Ali
6 Replies
6. Shell Programming and Scripting
Hi,
I am trying out different scripts in PERL. I want to take a line/string as an input from the user and count the number of occurrances of all the alphabets (a..z) in the string. I tried doingit like this :
#! /opt/exp/bin/perl
print "Enter a string or line : ";
$string = <STDIN>;
chop... (5 Replies)
Discussion started by: rsendhilmani
5 Replies
7. UNIX for Dummies Questions & Answers
I want to list the occurence of particular characters in a line. my file looks like this
a,b,c,d
e,f,g
h,y:e,g,y s
f;g,s,w
and I want to count how many commas are in each line so the file in the end looks like this:
a,b,c,d 3
e,f,g 2
h,y:e,g,y s 3
f;g,s,w ... (2 Replies)
Discussion started by: Audra
2 Replies
8. Shell Programming and Scripting
I have a comma delimited file that roughly has 300 fields. Not all fields are populated.
This file is fed into another system, what I need to do is count the amount of characters in each field and give me an output similiar to this:
1 - 6,2 - 25
The first number is the field and the second... (2 Replies)
Discussion started by: dbrundrett
2 Replies
9. Shell Programming and Scripting
Dears,
I would like to count the number of "(" and ")" that occur in a file.
(syntax checking script). I tried to use "grep -c" and this works fine as long as there is only one character (for which I do a search) on a line.
Has anyone an idea how I can count the number of specific characters... (6 Replies)
Discussion started by: plelie2
6 Replies
GIT-SH-SETUP(1) Git Manual GIT-SH-SETUP(1)
NAME
git-sh-setup - Common Git shell script setup code
SYNOPSIS
. "$(git --exec-path)/git-sh-setup"
DESCRIPTION
This is not a command the end user would want to run. Ever. This documentation is meant for people who are studying the Porcelain-ish
scripts and/or are writing new ones.
The git sh-setup scriptlet is designed to be sourced (using .) by other shell scripts to set up some variables pointing at the normal Git
directories and a few helper shell functions.
Before sourcing it, your script should set up a few variables; USAGE (and LONG_USAGE, if any) is used to define message given by usage()
shell function. SUBDIRECTORY_OK can be set if the script can run from a subdirectory of the working tree (some commands do not).
The scriptlet sets GIT_DIR and GIT_OBJECT_DIRECTORY shell variables, but does not export them to the environment.
FUNCTIONS
die
exit after emitting the supplied error message to the standard error stream.
usage
die with the usage message.
set_reflog_action
Set GIT_REFLOG_ACTION environment to a given string (typically the name of the program) unless it is already set. Whenever the script
runs a git command that updates refs, a reflog entry is created using the value of this string to leave the record of what command
updated the ref.
git_editor
runs an editor of user's choice (GIT_EDITOR, core.editor, VISUAL or EDITOR) on a given file, but error out if no editor is specified
and the terminal is dumb.
is_bare_repository
outputs true or false to the standard output stream to indicate if the repository is a bare repository (i.e. without an associated
working tree).
cd_to_toplevel
runs chdir to the toplevel of the working tree.
require_work_tree
checks if the current directory is within the working tree of the repository, and otherwise dies.
require_work_tree_exists
checks if the working tree associated with the repository exists, and otherwise dies. Often done before calling cd_to_toplevel, which
is impossible to do if there is no working tree.
require_clean_work_tree <action> [<hint>]
checks that the working tree and index associated with the repository have no uncommitted changes to tracked files. Otherwise it emits
an error message of the form Cannot <action>: <reason>. <hint>, and dies. Example:
require_clean_work_tree rebase "Please commit or stash them."
get_author_ident_from_commit
outputs code for use with eval to set the GIT_AUTHOR_NAME, GIT_AUTHOR_EMAIL and GIT_AUTHOR_DATE variables for a given commit.
create_virtual_base
modifies the first file so only lines in common with the second file remain. If there is insufficient common material, then the first
file is left empty. The result is suitable as a virtual base input for a 3-way merge.
GIT
Part of the git(1) suite
Git 2.17.1 10/05/2018 GIT-SH-SETUP(1)
