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1. UNIX for Beginners Questions & Answers
Hi,
Apologies in advance to the moderator if I am posting this the wrong way.
I've searched and found the solution to an old post but as it is a very old post, I don't see an option to update it with additional question.
The question I have is in relation to the following post:
How to... (6 Replies)
Discussion started by: newbie_01
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2. UNIX for Dummies Questions & Answers
Hi,
input:
AA|BB|CC
DD|EE
FF
what I am trying to get:
AA|BB|CC
DD|EE|
FF||
I tried to create first an UDF for printing repeats, but I think I have an issue with my END section or my array:
function repeat(str, n, rep, i)
{
for(i=1 ;i<n;i++)
rep=rep str
return rep
}
... (6 Replies)
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3. UNIX for Dummies Questions & Answers
Hi,
I am not sure if I've posted this question before.
Anyway, I previously asked about converting lines of text into a comma delimited string. Now I am needing to do the other way around ... :( :o
Can anyone advise how is this possible?
Example as below:
Converting records/lines to... (2 Replies)
Discussion started by: newbie_01
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Hi everyone,
i have a file that I had grep'd from something else lets call it file1.txt which consists variable files and lines due to different scenarios/inputs
1782
9182
fe35
ac67
how can I print this in this manner?
1782,9182,fe35,ac67
also if i had piped the new output... (2 Replies)
Discussion started by: prodigy06
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5. Shell Programming and Scripting
I have a comma (,) delimited file.
106232145,"medicare","medicare,medicaid",789
I would like to count the number of fields in each line.
I tried the below code
awk -F ',' '{print NF-1}'
This returns me the result as 5 instead of 4. This is because the awk takes... (9 Replies)
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6. UNIX for Advanced & Expert Users
I'm facing a strange problem, please help me out.
Here we go.
I want to count number of fields in particular file.
filename and delimiter character will be passed through parameter.
On command prompt if i type following i get 27 as output (which is correct)
cat customer.dat | head -1 | awk... (12 Replies)
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7. UNIX for Dummies Questions & Answers
Hello all,
Would appreciate if someone can help me out on the following requirement.
INPUT FILE:
--------------------------
TPS REPORT
abc def ghi
jkl mon pqr
stu vrs lll
END OF TPS REPORT
TPS REPORT
field1 field2 field3
field4 field5 field6 (8 Replies)
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8. UNIX for Dummies Questions & Answers
Hi,
I have a comma delimited file. I want to sort the fields alphabetically and again store them in a comma delimited file.
For example, My file looks like this.
abc,aaa,xyz,xxx,def
pqr,ggg,eee,iii,qqq
zyx,lmo,pqr,abc,fff
and I want my output to look like this, all fields sorted... (3 Replies)
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9. Shell Programming and Scripting
I have a situation where I am reading a text file line-by-line. Those lines of data contain comma separated fields of data. However, each line can vary in the number of fields it can contain. What I need to do is parse apart each line and write each field of data found (left to right) into a file.... (7 Replies)
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10. Shell Programming and Scripting
Hi,
Can anyone let me know on how to convert a Tab delimited file to Comma delimited file in Unix
Thanks!! (22 Replies)
Discussion started by: charan81
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TABMERGE(1p) User Contributed Perl Documentation TABMERGE(1p)
NAME
tabmerge - unify delimited files on common fields
SYNOPSIS
tabmerge [action] [options] file1 file2 [...]
Actions:
--min Take only fields present in all files [DEFAULT]
--max Take all fields present
-f|--fields=f1[,f2] Take only the fields mentioned in the
comma-separated list
Options:
-l|--list List available fields
--fs=x Use "x" as the field separator
(default is tab " ")
--rs=x Use "x" as the record separator
(default is newline "
")
-s|--sort=f1[,f2] Sort data ASCII-betically on field(s)
--stdout Print data in original delimited format
(i.e., not in a table format)
--help Show brief help and quit
--man Show full documentation
DESCRIPTION
This program merges the fields -- not the rows -- of delimited text files. That is, if several files are almost but not quite entirely
unlike each other in their structure (in their field names, numbers or orders), this script allows you to easily unify the files into one
file with all the same fields. The output can be based on fields as determined by the three "action" flags.
For the following examples, consider three files that contain the following fields:
+------------+---------------------------------+
| File | Fields |
+------------+---------------------------------+
| merge1.tab | name, type, position |
| merge2.tab | name, type, position, lod_score |
| merge3.tab | name, position |
+------------+---------------------------------+
To list all available fields in the files and the number of times they are present:
$ tabmerge --list merge*
+-----------+-------------------+
| Field | No. Times Present |
+-----------+-------------------+
| lod_score | 1 |
| name | 3 |
| position | 3 |
| type | 2 |
+-----------+-------------------+
To merge the files on the minimum overlapping fields:
$ tabmerge merge*
+----------+----------+
| name | position |
+----------+----------+
| RM104 | 2.30 |
| RM105 | 4.5 |
| TX5509 | 10.4 |
| UU189 | 19.0 |
| Xpsm122 | 3.3 |
| Xpsr9556 | 4.5 |
| DRTL | 2.30 |
| ALTX | 4.5 |
| DWRF | 10.4 |
+----------+----------+
To merge the files and include all the fields:
$ tabmerge --max merge*
+-----------+----------+----------+--------+
| lod_score | name | position | type |
+-----------+----------+----------+--------+
| | RM104 | 2.30 | RFLP |
| | RM105 | 4.5 | RFLP |
| | TX5509 | 10.4 | AFLP |
| 2.4 | UU189 | 19.0 | SSR |
| 1.2 | Xpsm122 | 3.3 | Marker |
| 1.2 | Xpsr9556 | 4.5 | Marker |
| | DRTL | 2.30 | |
| | ALTX | 4.5 | |
| | DWRF | 10.4 | |
+-----------+----------+----------+--------+
To merge and extract just the "name" and "type" fields:
$ tabmerge -f name,type merge*
+----------+--------+
| name | type |
+----------+--------+
| RM104 | RFLP |
| RM105 | RFLP |
| TX5509 | AFLP |
| UU189 | SSR |
| Xpsm122 | Marker |
| Xpsr9556 | Marker |
| DRTL | |
| ALTX | |
| DWRF | |
+----------+--------+
To merge the files on just the "name" and "lod_score" fields and sort on the name:
$ tabmerge -f name,lod_score -s name merge*
+----------+-----------+
| name | lod_score |
+----------+-----------+
| ALTX | |
| DRTL | |
| DWRF | |
| RM104 | |
| RM105 | |
| TX5509 | |
| UU189 | 2.4 |
| Xpsm122 | 1.2 |
| Xpsr9556 | 1.2 |
+----------+-----------+
To do the same but mimic the original tab-delimited input:
$ tabmerge -f name,lod_score -s name --stdout merge*
name lod_score
ALTX
DRTL
DWRF
RM104
RM105
TX5509
UU189 2.4
Xpsm122 1.2
Xpsr9556 1.2
Why would you want to do this? Suppose you have several delimited text files with nearly the same structure and want to create just one
file from them, but the fields may be in a different order in each file and/or some files may contain more or fewer fields than others.
(As far-fetched as it may seem, it happens to the author more than he'd like.)
SEE ALSO
o Text::RecordParser
o Text::TabularDisplay
AUTHOR
Ken Youens-Clark <kclark@cpan.org>.
LICENSE AND COPYRIGHT
Copyright (C) 2006-10 Ken Youens-Clark. All rights reserved.
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by
the Free Software Foundation; version 2.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
perl v5.10.1 2010-07-26 TABMERGE(1p)