Merge columns of different files


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting Merge columns of different files
# 8  
Old 01-18-2012
Quote:
Originally Posted by polsum
Hi, this code is working for the above mentioned example data, but its not working for the following tables. May I know why and how should I rectify the problem? thanks.

file 1

file 2

desired output is

But after using the code, I am getting only the first column, not the 2nd and third.

I am not sure what the problem is?

thanks in advanceSmilie

I just test the code using your sample data, it works fine, my guess is the format of files make you fail, so please run
Code:
 dos2unix file1 file2

first, then re-run the awk code, see if it work.
# 9  
Old 01-18-2012
I tried that, but still not working. Your first code (for just 2 files)
Code:
awk '{if($1 in a){sub("0" FS,"",a[$1]);a[$1]=a[$1] FS $2}else{a[$1]="0" FS2}}END{for(i in a)print i,a[i]}'

works just fine if I use 2 files. But the 2nd code doesn't work.
# 10  
Old 01-18-2012
Tha't weird, how about this?
Code:
awk 'FNR==1{t++}{a[t" "$1]=$2;b[$1]}END{for(i in b){printf i ;for(j=1;j<=t;j++)printf FS (length(a[j" "i])?a[j" "i]:"0");print ""}}'

or you can use "cat -A" to see if there're some weird word in your files.
# 11  
Old 01-18-2012
Quote:
Originally Posted by yinyuemi
Tha't weird, how about this?
Code:
awk 'FNR==1{t++}{a[t" "$1]=$2;b[$1]}END{for(i in b){printf i ;for(j=1;j<=t;j++)printf FS (length(a[j" "i])?a[j" "i]:"0");print ""}}'

or you can use "cat -A" to see if there're some weird word in your files.
Now this code is working just fine.Smilie Thanks a lot. I dont understand why the first one is not working though.
Login or Register to Ask a Question

Previous Thread | Next Thread

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Merge specific columns of two files

Hello, I have two tab delimited text files. Both files have the same number of rows but not necessarily the same number of columns. The column headers look like, File 1: f0order CVorder Name f0 RI_9 E99 E199 E299 E399 E499 E599 E699 E799 E899 E999 File 2:... (9 Replies)
Discussion started by: LMHmedchem
9 Replies

2. Shell Programming and Scripting

Merge files based on columns

011111123444 1234 1 20000 011111123444 1235 1 30000 011111123446 1234 3 40000 011111123447 1234 4 50000 011111123448 1234 3 50000 File2: 011111123444,Rsttponrfgtrgtrkrfrgtrgrer 011111123446,Rsttponrfgtrgtr 011111123447,Rsttponrfgtrguii 011111123448,Rsttponrfgtrgtjiiu I have 2 files... (4 Replies)
Discussion started by: vinus
4 Replies

3. Shell Programming and Scripting

Merge columns from multiple files

Hello and Good day I have a lot of files with same number of rows and columns.$2 and $3 are the same in all files . I need to merge $2,$3,$6 from first file and $6 from another files. File1: $1 $2 $3 $4 $5 $6... (8 Replies)
Discussion started by: ali.seifaddini
8 Replies

4. Shell Programming and Scripting

Merge 2 files with one reference columns

Hi All Source1 servername1,patchid1 servername1,patchid2 servername1,patchid3 servername2,patchid1 servername2,patchid2 servername3,patchid4 servername3,patchid5 Source2 servername1,appname1 servername1,appname2 servername1,appname3 servername2,appname1 servername2,appname2... (13 Replies)
Discussion started by: mv_mv
13 Replies

5. Shell Programming and Scripting

Merge columns on different files

Hello, I have two files that have this format: file 1 86.82 0.00 86.82 43.61 86.84 0.00 86.84 43.61 86.86 0.00 86.86 43.61 86.88 0.00 86.88 43.61 file 2 86.82 0.22 86.84 0.22 86.86 0.22 86.88 0.22 I would like to merge these two files such that the final file looks like... (5 Replies)
Discussion started by: kayak
5 Replies

6. UNIX for Dummies Questions & Answers

Merge columns from multiple files

Hi all, I've searched the web for a long time trying to figure out how to merge columns from multiple files. I know paste will append columns like so: paste file1 file2 file3 file4 file5 ... But this becomes inconvenient when you want to append a large number of files into a single file. ... (2 Replies)
Discussion started by: torchij
2 Replies

7. Shell Programming and Scripting

Merge two files matching columns

Hi! I need to merge two files when col1 (x:x:x) matching and adds second column from file1.txt. # cat 1.txt aaa;a12 bbb;b13 ccc;c33 ddd;d55 eee;e11 # cat 2.txt bbb;b55;34444;d55 aaa;a15;35666;a44 I try with this awk and I get succesfully first column from 1.txt: # awk -F";"... (2 Replies)
Discussion started by: fhluque
2 Replies

8. UNIX for Dummies Questions & Answers

Merge two files with two columns being similar

Hi everyone. How can I merge two files, where each file has 2 columns and the first columns in both files are similar? I want all in a file of 4 columns; join command removes the duplicate columns. 1 Dave 2 Mark 3 Paul 1 Apple 2 Orange 3 Grapes to get it like this in the 3rd file:... (9 Replies)
Discussion started by: Atrisa
9 Replies

9. Shell Programming and Scripting

merge the two files which has contain columns

Hi may i ask how to accomplish this task: I have 2 files which has multiple columns first file 1 a 2 b 3 c 4 d second file 14 a 9 .... 13 b 10.... 12 c 11... 11 d 12... I want to merge the second file to first file that will looks like this ... (2 Replies)
Discussion started by: jao_madn
2 Replies

10. UNIX for Dummies Questions & Answers

compare columns from 2 files and merge

Dear all, Being new to Unix i have a problem. I have 2 files: File 1: 118,1,0,2,3,0,5,0.3,0,0.3,0.6,1 118,2,1,2,2,0,5,0.4,0,0.4,0.4,1 118,4,2,0,3,0,5,0.7,0,0.3,0.6,1 118,6,4,1,0,0,5,0.8,0,0.2,0,1 File 2: 118,1,BFGL-NGS-109695,3610326,0,18,1,0.556,0.389,0.056,0.25,0.8183... (2 Replies)
Discussion started by: samwilkinson
2 Replies
Login or Register to Ask a Question