10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I have to mine the following sequence pattern from a large fasta file namely gene.fasta (contains multiple fasta sequences) along with the flanking sequences of 5 bases at starting position and ending position,
AAGCZ-N16-AAGCZ
Z represents A, C or G (Except T)
N16 represents any of the four... (3 Replies)
Discussion started by: dineshkumarsrk
3 Replies
2. UNIX for Beginners Questions & Answers
Hi All ,
I am having an input file as stated below
5728 U_TOP_LOGIC/U_CM0P/core/u_cortexm0plus/u_top/u_sys/u_core/r03_q_reg_20_/Q 011
611 U_TOP_LOGIC/U_CM0P/core/u_cortexm0plus/u_top/u_sys/u_core/r04_q_reg_20_/Q 011
3486... (4 Replies)
Discussion started by: kshitij
4 Replies
3. Shell Programming and Scripting
Hey guys,
I want the below files to be processed with the help of BASH so that i will be able to find the missing file names :
PP01674520141228X.gz
PP01674620141228X.gz
PP01674820141228X.gz
PP01674920141228X.gz
PP01675420141228X.gz
PP01675520141228X.gz
PP01676020141228X.gz
.
.
.
.... (4 Replies)
Discussion started by: TANUJ
4 Replies
4. Shell Programming and Scripting
HI,
Can you tell me how to find the number of digits in a word.
$cat data.txt
+123456ad
87645768
Output should be
6
8 (5 Replies)
Discussion started by: ashwin3086
5 Replies
5. Shell Programming and Scripting
Using these strings as an example:
<a onclick="doShowCHys=1;ShowWindowN(0,'/daman/man.php?asv4=145148&playTogether=True',960,540,943437);return false;" title="">
<a onclick="doShowCHys=1;ShowWindowN(0,'/daman/man.php?asv4=1451486&playTogether=True',960,540,94343);return false;" title="">
<a... (12 Replies)
Discussion started by: metallica1973
12 Replies
6. Shell Programming and Scripting
Hi all,
I have a file like this
ID 3BP5L_HUMAN Reviewed; 393 AA.
AC Q7L8J4; Q96FI5; Q9BQH8; Q9C0E3;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 05-SEP-2012, entry version 71.
FT COILED 59 140 ... (1 Reply)
Discussion started by: manigrover
1 Replies
7. Shell Programming and Scripting
Hello all! I've looked all over the internet and this site and have come up a loss with an easy way to make a bash script to do what I want to do. I have a file with a naming convention as follows:
2012-01-18 string of words here 123.jpg
2012-01-18 string of words here 1234.jpg
2012-01-18... (2 Replies)
Discussion started by: Buzzman25
2 Replies
8. Shell Programming and Scripting
Hi,
I just need to check whether number of digits in a phone number is 10 or not. If I am not wrong regex will be: {9}
I have to use this inside nawk as this is a small portion of a big program.
nawk '
BEGIN { RS="";FS=";";
regex="{9}";
}
{
for (i=1;i<=NF;i++) {
if... (6 Replies)
Discussion started by: shekhar2010us
6 Replies
9. Shell Programming and Scripting
Hi
Following is an example line.
echo "192.22.22.22 \"33dffwef\" 200 300 dsdsd" | sed "s:\(\ *\ \):\1:"
I want it's output to be
200
However this is not the case. Can you tell me how to do it? I don't want to use AWK for this. Secondly, how can i fetch just 300? Should I use "\2"... (3 Replies)
Discussion started by: shahanali
3 Replies
10. Shell Programming and Scripting
print out 201 in following string, Please note the chars before 201 are random, no fixed format.
ua07app201 (20 Replies)
Discussion started by: honglus
20 Replies