If you want SUB_ID and SOURCE at 3rd and 4th column, then change the code accordingly.
That's more or less what I am trying to figure out how to do. I can get the three cols I want, but they are the last three, not cols 3 4 and 5. There is also a blank col.
Just to clarify, based on the command (different from the last post)
I assume that in the print statement, $3 refers to the 3rd field of file a1_temp, and b[1] refers to the 1st field of file a2_temp???
If that is correct, in the printout I should get cols 1 and 2 of a2_temp (b[1],b[2]), which should be "id", "filePath". Then I should get cols 3, 4, and 5 from a1_temp, followed by cols 3,4, and 5 from a2_temp. Instead, I am getting all 39 cols from a1_temp, followed by a blank col, followed by the three cols I want from a2_temp. This isn't a disaster, as I can further edit the file with cut, but I would like to better understand the syntax of what I'm trying to do here.
LMHmedchem
Hello,
I have 40 data files where the first three columns are the same (in theory) and the 4th column is different. Here is an example of three files,
file 2: A_f0_r179_pred.txt
Id Group Name E0
1 V N(,)'1 0.2904
2 V N(,)'2 0.3180
3 V N(,)'3 0.3277
4 V N(,)'4 0.3675
5 V N(,)'5 0.3456
... (8 Replies)
Hi, I am trying to selectively merge two files based on keys reported in the 1st column.
File1:
#file1-header1
file1-header2
111 qwe rtz uio
198 asd fgh jkl
165 yxc
789 poi uzt rew
89 lkj
File2:
#file2-header2
file2-header2
165 ghz nko2 ... (2 Replies)
Hi all,
Say i have multiple files x1 x2 x3 x4, all with common header (date, time, year, age),,
How can I merge them to one singe file "X" in shell scripting
Thanks for your suggestions. (2 Replies)
Hi,
I have two files A (2190 rows) and file B (1100 rows). I want to merge the contents of two files based on common field, also I need the unmatched rows from file A
file A:
ABC
XYZ
PQR
file B:
>LMN|chr1:11000-12456:
>ABC|chr15:176578-187678:
>PQR|chr3:14567-15866:
output... (3 Replies)
I have a need to merge two files on the value of an index column.
input file 1
id filePath MDL_NUMBER
1 MFCD00008104.mol MFCD00008104
2 MFCD00012849.mol MFCD00012849
3 MFCD00037597.mol MFCD00037597
4 MFCD00064558.mol MFCD00064558
5 MFCD00064559.mol MFCD00064559
input file 2
... (9 Replies)
Hi,
I have two files that I would like to merge and think that there should be a solution using awk. The files look something like this:
file 1
IDX1 IDY1
IDX2 IDY2
IDX3 IDY3
file 2
IDY1 dataA data1
IDY2 dataB data2
IDY3 dataC data3
Desired output
IDX1 IDY1 dataA data1
IDX2 ... (5 Replies)
I have 100 data files labelled 250.1.txt through 250.100.txt. The second column of the data files partially match (there is about %90 overlap). Each data file has 4 columns.
I want the merge all these text files by the matching values in the second column. In the output, the first column should... (1 Reply)
I'm running on freebsd -- with a default shell of csh.
I have two files named A and B. Each line of each file contains a file name. How can I write a script that removes all the file names in file B from A.
I tried to use perl to create a huge regular expression with "|" separating the file... (2 Replies)
hi,
i am facing a problem in merging two files using awk,
the problem is as stated below,
file1:
A|B|C|D|E|F|G|H|I|1
M|N|O|P|Q|R|S|T|U|2
AA|BB|CC|DD|EE|FF|GG|HH|II|1
....
....
....
file2 :
1|Mn|op|qr (2 Replies)
