10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
The awk below when run using the contents of file, works great with the desired output of
expName
barcodeSampleInfo barcodedSamples
.
However, when the complete file is used (attached) I get different output. It looks like the same data is there but the ordering is off. Both data sets are... (2 Replies)
Discussion started by: cmccabe
2 Replies
2. Shell Programming and Scripting
I am trying to output the matches between $1 of file1 to $3 of file2 into a new file match.
I am also wanting to output the mismatches between those same 2 files and fields to two separate new files called missing from file1 and missing from file2. The input files are tab-delimited, but the... (9 Replies)
Discussion started by: cmccabe
9 Replies
3. Shell Programming and Scripting
I have two large files (~250GB) that I am trying to remove the where GT: 0/0 or 1/1 or 2/2 for both files. I was going to use a bash with the below awk, which I think will find each line but how do I remove that line is that condition is found? Thank you :).
Input
20 60055 . A ... (4 Replies)
Discussion started by: cmccabe
4 Replies
4. Shell Programming and Scripting
I currently have this code:
awk ' BEGIN { FS = OFS = "|"} { l=length($1) $1 = sprintf("%s-%s-%s %s:%s:%s", substr($1, l - 13, 4), substr($1, l - 9, 2), substr($1, l - 7, 2), substr($1, l - 5, 2), substr($1, l - 3, 2), substr($1, l - 1)) print }' infile exit
Lets say I also wanted to modify $11... (4 Replies)
Discussion started by: LDHB2012
4 Replies
5. Shell Programming and Scripting
I am using awk to read lines from a CSV file then put data into other files. These other files are named using the value of a certain column. Column 7 is a name such as "att" or "charter" . I want to end up with file names with the value of column 7 appended to them, like this:
... (5 Replies)
Discussion started by: dodgerfan78
5 Replies
6. Shell Programming and Scripting
It seems like a common task, but I haven't been able to find the solution.
vitallog.txt
1310,John,Hancock
13211,Steven,Mills
122,Jane,Doe
138,Thoms,Doe
1500,Micheal,May
vitalinfo.txt
12122,Jane,Thomas
122,Janes,Does
123,Paul,Kite
**OUTPUT**
vitalfiltered.txt
12122,Jane,Thomas... (2 Replies)
Discussion started by: charles33
2 Replies
7. UNIX for Dummies Questions & Answers
:wall:
I am trying to do the following using awk (is that the best way?):
Read 2 files created from the output of df (say, on different days) and compare the entries using the 1st (FileSys) and 6th (Mount) fields to see if the size has changed. Output (at least), to a new file (some header... (2 Replies)
Discussion started by: renata
2 Replies
8. Shell Programming and Scripting
Hi All,
Looking for a quick AWK script to output some differences between two files.
FILE1
device1 1.1.1.1 PINGS
device1 2.2.2.2 PINGS
FILE2
2862 SITE1 device1-prod 1.1.1.1 icmp - 0 ... (4 Replies)
Discussion started by: stacky69
4 Replies
9. Shell Programming and Scripting
Well, it didn't take me long to get stumped again. I assure you that I'm not mentally deficient, just new to scripting.
So, here's the gist. I want to redirect output from awk based off of which branch of an if-else statement under which it falls.
#!/bin/bash
#some variables... (2 Replies)
Discussion started by: mikesimone
2 Replies
10. Shell Programming and Scripting
Hi,
I am trying to do the following using AWK program.
1. Read the input data file
2. Parse the record and see if it contains errors
3. If the record contains errors, then write it into Reject file, else, write into usual output file or display it on the screen
Here is what I have done -... (6 Replies)
Discussion started by: vidyak
6 Replies