10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
I have 5 sequences in a fasta file namely gene1.fasta as follows,
gene1.fasta
>1256
ATGTAGC
>GEP
TAGAG
>GTY578
ATGCATA
>67_iga
ATGCTGA
>90_ld
ATGCTG
I need to rename the gene1.fasta file based on the sequence position specified in list.txt as follows,
list.txt
position1=org5... (5 Replies)
Discussion started by: dineshkumarsrk
5 Replies
2. Shell Programming and Scripting
In the below bash I am trying to copy the only text file (always only one) in /home/cmccabe/Desktop/list/QC/metrics.txt and rename each of the 3 text files according to /home/cmccabe/Desktop/test/list.txt using lines 3, 4 ,5. This format (that is list.txt) is always 5 lines. Thank you :).
... (12 Replies)
Discussion started by: cmccabe
12 Replies
3. UNIX for Beginners Questions & Answers
Hello!
New here although not completely new to Unix.
I wonder how I could rename files based on the data found in a simple textfile.
It goes like this:
I have 4 files
1 ldfgkkfjslkdfjsldkfjsf.wav
2 nndsdflksdjf.wav
3 sdflksjdf jjsdflsdfl.wav
4 dkadsdddd.wav
Textfile.txt looks like... (14 Replies)
Discussion started by: Oortone
14 Replies
4. Shell Programming and Scripting
Hello, I have a text file "file.list" with the contents below.
file1
filename1
file2
filename2
file3
filename3
file1, file2 and file3 are files existing in the same directory as the text file file.list.
I want to rename file1 to filename1, file2 to filename2, as show in the text... (1 Reply)
Discussion started by: james2009
1 Replies
5. Shell Programming and Scripting
I am trying to use the two files shown below to either remove or rename contents in one of those files. If in file1.txt $5 matches $5 of file2.txt and the value in $1 of file1.txt is not "No Match" then that value is substituted for all values in $5 and $1 of file2.txt. If however in $1 ... (5 Replies)
Discussion started by: cmccabe
5 Replies
6. Shell Programming and Scripting
Hello,
I am new to shell
I have a folder which contains a list of files, all the files contain the separator :
I need to replace this character for all the filenames (by batch)
ex: hello:world should become hello-world
please help
Thanks (3 Replies)
Discussion started by: sikilaklak
3 Replies
7. Shell Programming and Scripting
Hello,
I've been searching and reading, but I can't figure out how to solve this problem with my newbie skills.
In my directory, I have a list of files (see dirlist.txt attachment) that I need to merge and rename. I have part of the code of the code figured out (see below). However, I... (3 Replies)
Discussion started by: anjulka
3 Replies
8. Shell Programming and Scripting
Hi everyone.
I'm in need of a solution where i need to rename a folder to a name that's inside an XML file in that folder.
OS is Ubuntu 9.10 with Gnome.
I've tried using grep, sed and xpath, but can't seem to find a solution.
This is the simplified folder structure:
FOLDER-NAME
-... (4 Replies)
Discussion started by: CoolCow
4 Replies
9. Shell Programming and Scripting
I am trying to rename files based on the created/born date of the file. I Have a total of 4000 files that i am trying to do this with and would like it to be log_yyyymmddhh.gz right now the files are maillog.???.gz.
Can anyone point me in the right direction of how to get this done via scipt?
... (4 Replies)
Discussion started by: Paulb
4 Replies
10. UNIX for Dummies Questions & Answers
I'm looking to determine if I can use a grep command to read file and rename the file based on the first 3 characters of the data in the file.
An example is:
Read FileA
If the first 3 positions of the data in the file are "ITP", then rename the file as FileA_ITP, else if the first 3... (3 Replies)
Discussion started by: jchappel
3 Replies