10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
Hello,
I have the following script
while read id fraction
do
sambamba -h -f bam -t 10 --subsampling-seed=50 -s $frac ${id}.bam -o ${id}.out.bam
done < fraction.txt
where fraction.txt has two columns (id,fraction) and 50 rows
I am unable to run this as bash is not able to read the second... (2 Replies)
Discussion started by: nans
2 Replies
2. Shell Programming and Scripting
Hi,
I am facing some error while doing the comparision between 2 decimal values in bash. Pl help me out.
I have tried using below scripts. But its giving me error.
1)amt=12.3 opn_amt=12.5 var=$(awk 'BEGIN{ print "'$amt'"<"'$opn_amt'" }')
if ;then echo "correct" else echo "Wrong"... (3 Replies)
Discussion started by: Siba Tripathy
3 Replies
3. Shell Programming and Scripting
I have a number in a bash variable n, and want to round it to 2 decimal places. How can I do that?
n=0.0867268
Need to have
num=0.09 (1 Reply)
Discussion started by: kristinu
1 Replies
4. Shell Programming and Scripting
Greetings.
I have a nice bash shell script that runs a multi-step analysis well. I already have the SGE options set up to email me the progress of the run (started, completed, aborted), but a final step would be to code the shell script to email the final output (a .txt file) to the same email... (6 Replies)
Discussion started by: Twinklefingers
6 Replies
5. Shell Programming and Scripting
I need decimal comparing with if. Check if apache version is less than 2.2.17.
I tried this and not working.
#!/bin/bash
apachever=`/usr/local/apache/bin/httpd -v | head -1 | awk '{print $3}' |cut -d/ -f 2`
if ]; then
echo "Apache version less than 2.2.17"
else
... (7 Replies)
Discussion started by: anil510
7 Replies
6. Shell Programming and Scripting
a=10.00
pattern=-11.00
b=`echo "$a $pattern" | awk ' printf("%d\n", $1 + $2)'`
echo $b
not working, also trined bc ,dc but thats not on my m/c.
also expr not supporting.
any clue? (6 Replies)
Discussion started by: saluja.deepak
6 Replies
7. Shell Programming and Scripting
Hi I want to incremental add hex decimal number to a particula field in file
eg: addr =123 dept1=0
addr = 345 dept2 =1
addr2 = 124 dept3 =2
.
.
.
.
.
.
addr3 =567 dept15 =f
Is there any command which add... (8 Replies)
Discussion started by: diddi_linux
8 Replies
8. Shell Programming and Scripting
Hello everybody,
I would like to understand why the printf function is returning me an octal value with this command :
printf %4.4d 0010 returns 0008
printf %4.4d 10 returns 0010
Thanks for help. (3 Replies)
Discussion started by: dolphin06
3 Replies
9. Shell Programming and Scripting
What is the correct syntax to limit the number of decimals to 1 or 0 in a bash script? Here is the partial code I have which works, but if I echo $meters, it has 4 or 5 decimals:
METERS=`echo "$FEET * 0.3048" | bc`
I read about scale and length in the bc man page, but I can't seem to get the... (2 Replies)
Discussion started by: audiophile
2 Replies
10. Shell Programming and Scripting
Hi,
I have a list of values from associative array from 0,..till 1.0000.
I tried various sort options; sort -g, sort -nr but it still couldnt work. In other words, the numbers are not sorted accordingly.
Please help.
Thanks. (1 Reply)
Discussion started by: ahjiefreak
1 Replies