How to find the matching numbers between 2 files Using R language??


 
Thread Tools Search this Thread
Top Forums Shell Programming and Scripting How to find the matching numbers between 2 files Using R language??
# 1  
Old 04-30-2010
Bug How to find the matching numbers between 2 files Using R language??

Hi friends,,

I need ur help very urgently.I have 2 files which have more than 5000 numbers,I want to find the matching numbers between 2 files using R language.I dont know how to use for loop in R.I tried to get a result,,but didnt get,

file1 is like
1061909
1162391
1163725
1923192
1923192
2992447
3120239


file 2 like
chr1 999083 275
chr1 1004853 63
chr1 1061909 56
chr1 1162391 30
chr1 1163725 28
chr1 1598130 11
chr1 1681087 79


my output should be like this
chr1 1061909 56
chr1 1162391 30
chr1 1163725 28

pls help me friends,,I need a program very urgent.

Thanks..
by
SmilieSuresh
# 2  
Old 04-30-2010
Why can you not use shell or awk? Is this homework?
Login or Register to Ask a Question

Previous Thread | Next Thread

9 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Find matching timestamps in two files.

OK. if the first file is : 3184 2014-07-28 04:15 global.Remote-Access 10.111.8.25 81.245.6.25 tcp 3268 3035 2014-07-28 04:16 global.Remote-Access 10.111.8.12 81.245.6.25 tcp 3268If the second file is: 1 Jul 28 04:12 2014-07-28 id967254(BGC-TLW-Cert) Tunneling: User with IP... (8 Replies)
Discussion started by: fxsme
8 Replies

2. UNIX for Dummies Questions & Answers

find Search - Find files not matching a pattern

Hello all, this is my first and probably not my last question around here. I do hope you can help or at least point me in the right direction. My question is as follows, I need to find files and possible folders which are not owner = AAA group = BBB with a said location and all sub folders ... (7 Replies)
Discussion started by: kilobyter
7 Replies

3. Shell Programming and Scripting

To find files by matching a pattern in file name

Hi all, I have to check whether certain files exist using a if statement. I have to check this by matching a pattern of filename: e.g. if ] This statement should be "true" if any files like test.dat11, test.dat22 etc are present in the source dir. However, this statement is checking only... (2 Replies)
Discussion started by: sweety123
2 Replies

4. Shell Programming and Scripting

How to find the matching data b/w 2 files in perl?

Hi friends,, i have find the matching data between 2files. My file1 have a data like rs3001336 rs3984736 rs2840532 File2 have a data like rs3736330 1 2359237 A G 0.28 1.099 0.010 rs2840532 1 2359977 G A 0.363 0.3373 1.123 rs3001336 1 ... (4 Replies)
Discussion started by: sureshraj
4 Replies

5. Programming

How to find the matching data b/w 2 files in perl?

Hi friends,, i have find the matching data between 2files. My file1 have a data like rs3001336 rs3984736 rs2840532 File2 have a data like rs3736330 1 2359237 A G 0.28 1.099 0.010 rs2840532 1 2359977 G A 0.363 0.3373 1.123 rs3001336 1 2365193 G A 0.0812 0.07319 1.12 ... (1 Reply)
Discussion started by: sureshraj
1 Replies

6. UNIX for Dummies Questions & Answers

find files NOT matching name pattern

Hi, I have following files in my directory: /TESTDONTDEL> ls -alt total 14 drwxr-xr-x 2 oracle dba 1024 May 15 06:30 . -rw-r--r-- 1 oracle dba 40 May 15 06:30 exception.txt -rw-r--r-- 1 oracle dba 19 May 15 06:22 ful_1234_test1.txt -rw-r--r-- 1... (2 Replies)
Discussion started by: sagarparadkar
2 Replies

7. UNIX for Dummies Questions & Answers

Find files matching a pattern

Hi, I am writing a BASH shell script. I would like to count all the files in the CURRENT directory matching a specific pattern. Could someone suggest the best/simplest way to do this. I have thought of these solutions (for simplicity the pattern is all files starting with A): ls -1 *A | wc -l... (5 Replies)
Discussion started by: msb65
5 Replies

8. Post Here to Contact Site Administrators and Moderators

program to find the uncommon numbers between two files.

Hi, I need to extract the uncommon numbers from file1 and file2 For Example: File1 1 2 3 4 5 File2 1 2 3 4 5 6 (2 Replies)
Discussion started by: salaathi
2 Replies

9. UNIX for Dummies Questions & Answers

Find matching lines between 2 files

How do I find matching lines between two files? (5 Replies)
Discussion started by: jojojmac5
5 Replies
Login or Register to Ask a Question