Deletion of a particular character


 
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# 1  
Old 07-16-2009
Deletion of a particular character

How to delete a particular character in a file and then removing the spaces created by that removal.I am working with a text file containing nucleotide sequences.
I have tried sed command but it replaces N with spaces.

example:I want to delete all the N without creating a space after its removal

Input:
acgtaccctttaaNNNNNNNNNNccta
acaattaNNNacatactgatgactctaa
acatcagtcagtaacgtgtactgatacga

Output:
acgtaccctttaacctaacaattaacata
ctgatgactctaaacatcagtcagtaacg
tgtactgatacga

ankita
# 2  
Old 07-16-2009
Code:
sed 's/N//g' inputfile

Code:
tr -d N inputfile

Jean-Pierre.
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