10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
In a huge log file (43MB, 43k lines) I am trying to extract data between two tag pairs on same line and export it to a file so I can pull it into Excel for a report.
One Pair is <Text>data I need</Text>
Other pair follows on same line and is <TimeStamp>more data I need</TimeStamp>
I would need... (2 Replies)
Discussion started by: NanookArctic
2 Replies
2. UNIX for Dummies Questions & Answers
Can sort sort by pair of lines?
infile:
ID 15
GNJSMKSNS
ID 25
GNJSMKSNS
ID 1
GNJSMKSNS
outfile:
ID 1
GNJSMKSNS
ID 15
GNJSMKSNS
ID 25
GNJSMKSNS
sort -grk 2 obviously does not work (4 Replies)
Discussion started by: Xterra
4 Replies
3. UNIX for Dummies Questions & Answers
Hi,
I would like to batch concatenate files by pairs. I have quite a few of them so I would not like to do that pair by pair separately.
the names of the file is of the type:
file1.fastq
newfile1_new.fastq
file2.fastq
newfile2_new.fastq
and so on...
I would like to concatenate file1... (2 Replies)
Discussion started by: jawad
2 Replies
4. Shell Programming and Scripting
Hi all,
Please guide. It has to do with parsing the input file names.
I have a fairly large number of files, I want to do some operations on them in a pairwise fashion (every file has a pair).
The names are in the following pattern, with the pairs of files named with _1 and _2 , the... (4 Replies)
Discussion started by: newbie83
4 Replies
5. Shell Programming and Scripting
I am extracting a number of key/value pairs in awk using following:
awk '
/xyz_session_id/ {
n=index($0,"xyz_session_id");
id=substr($0,n+15,25);
a=$4;
}
END{
for (ix in a) { print a }
}'
I don't like this Index + substr with manually calculated... (5 Replies)
Discussion started by: migurus
5 Replies
6. Shell Programming and Scripting
Hi I have a multi-step project I am working on and have been finding it difficult to come up with the correct approach.
The data I have been given resembles:
Index Chr Genotype Mutation Type
1 Chr1 TT Intronic
2 Chr1 AA ... (27 Replies)
Discussion started by: drossy
27 Replies
7. Shell Programming and Scripting
Hi,
I am trying to paste together two files which are like this-
1
2
4 and
2
3
4
The paste command would work by default for this case, but when there are cases where the number of entries are different in each file. for eg:
1
3 and
1
3
4
I want to make it such that the odd... (11 Replies)
Discussion started by: jamie_123
11 Replies
8. Shell Programming and Scripting
Hi,
I have a text file with the following contents
/C=IT/O=INFN/OU=Personal Certificate/L=Napoli/CN=Some guy
/C=IT/O=INFN/CN=INFN CA
/O=Grid/O=NorduGrid/OU=uninett.no/CN=Another guy
/O=Grid/O=NorduGrid/CN=NorduGrid Certification Authority
/C=TW/O=AP/OU=GRID/CN=Someone else... (5 Replies)
Discussion started by: kerl
5 Replies
9. Shell Programming and Scripting
Hello,
I have a file Pairs.txt composed of 3 columns. For simplicity, this is the file:
A B C
B D W
X Y Z
Z W K
B A C
Y J Q
F M P
Y X Z
I am trying to reduce the file such that I only keep the first occurrence of any "pair". In the example above, I would only want to keep one... (6 Replies)
Discussion started by: InfoSeeker
6 Replies
10. Shell Programming and Scripting
Hello all
im facing some kind of problem i have this string :
functionA() $" "$ functionB("arg1") $" = "$
i will like to replace all the pairs of opening and closing "$" to be something like that
functionA() <#" "#> functionB("arg1") <#" = "#>
i cant of course do is with simple ... (1 Reply)
Discussion started by: umen
1 Replies