10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I am trying to output the matches between $1 of file1 to $3 of file2 into a new file match.
I am also wanting to output the mismatches between those same 2 files and fields to two separate new files called missing from file1 and missing from file2. The input files are tab-delimited, but the... (9 Replies)
Discussion started by: cmccabe
9 Replies
2. UNIX for Dummies Questions & Answers
I have one input file ABC.txt and one output DEF.txt. After the ABC is processed and created output, I want to rename ABC.txt to ABC.orig and DEF to ABC.txt. Currently when I am doing this, it does not process the input file as it cannot read and write to the same file. How can I achieve this?
... (12 Replies)
Discussion started by: High-T
12 Replies
3. Shell Programming and Scripting
Hi Guys,
I am using set -x in my script to track the flow of the script.
But if i want to write the output of the set -x into a log file, how do i do it?
Thanks,
Ajay (3 Replies)
Discussion started by: Ajay Venkatesan
3 Replies
4. Programming
Hello,
I extracted a list of files in a directory with the command ls . However this is not my computer, so the ls functionality has been revamped so that it gives the filesizes in front like this :
This is the output of ls command : I stored the output in a file filelist
1.1M... (5 Replies)
Discussion started by: ajayram
5 Replies
5. Shell Programming and Scripting
Hello all,
I wrote this command line for some calculation on my given input files based on another input file which is a txt file.
while read BAM REGION; do samtools view $BAM $REGION | awk '{if ($2==0) print $0}' | wc -l >>log.txt; echo "$REGION"; done >> log.txt <regions.txt
It takes... (4 Replies)
Discussion started by: @man
4 Replies
6. UNIX for Dummies Questions & Answers
Hi All. Thanks for your help in advance.
I have a requirement to examine the number of delimiters in each record of a file. If the record has the expected number of delimiters it should be passed into a 'good' file. If it does not, the record should be passed into a 'bad' file. I have been able... (8 Replies)
Discussion started by: codestar1
8 Replies
7. UNIX for Dummies Questions & Answers
I have a script where the the 9th line looks like this:
$filename=sprintf("250.1chr%d.ped", $N);
I want to modify this script 1000 times, changing 250.1chr%d.ped to 250.2chr%d.ped, 250.3chr%.ped.......and so on all the way to 250.1000chr%d.ped and store each output in files called
... (4 Replies)
Discussion started by: evelibertine
4 Replies
8. Shell Programming and Scripting
Hi
my input file is
<so > < Time > <Pid> <some ro><Job Name>
111004 04554447 26817 JOB03275 MBPDVLOI
111004 04554473 26817 JOB03275 MBPDVLOI
111004 04554778 26807 JOB03276 MBPDVAWD
111004 04554779 26807 JOB03276 MBPDVAWD
111004 04554780 26817 ... (4 Replies)
Discussion started by: rakeshkumar
4 Replies
9. Shell Programming and Scripting
Hi
I have files in our UNIX directory like the below
-rw-r--r-- 1 devinfo devsupp 872 Sep 14 02:09 IMGBTREE27309_12272_11_1_0_FK.idx0
-rw-r--r-- 1 devinfo devsupp 872 Sep 14 02:09 IMGBTREE27309_12272_11_0_0_PK.idx0
-rw-r--r-- 1 devinfo devsupp 432 Sep 14... (7 Replies)
Discussion started by: rbmuruga
7 Replies
10. UNIX for Dummies Questions & Answers
Helllo UNIX Forum :)
Since I am posting on this board, yes, I am new to UNIX!
I read a copy of "UNIX made easy" from 1990, which felt like a making a "computer-science time jump" backwards ;)
So, basically I have some sort of understanding what the basic concept is.
Problem Description:... (6 Replies)
Discussion started by: Kasimir
6 Replies