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It works! Thank you so much Scrutinizer!

So the solution is as follows:
tag -0 -f "Note" . | xargs -0 -I {} rename 's|(.*)/|$1/.|' {}

I tired :
tag -0 -f "Note" . | xargs -0 -I {} rename -n 's|.*/|$0/.|' {}

It starts to add the '.' to the file, however it removed out the subdirectory completely like this:...

Hi Scrutinizer,

Thanks for the quick response.

for tag command :
tag -0 -f "Note" . | xargs -0 -I {} echo {}

It only echo out a list of files including directories. Something like this...

I am trying find files in sub dir with certain tags using tag command, and add the period to the beginning. I can't use chflags hidden {} cause it doesn't add period to the beginning of the string...