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Move the closing ! to the first character of the line:


read var1 var2 junk << !
$(sed -n '2p' fit_par.dat)
!


Output:
file1 2 0



When all is said and done, if it's always...

Without seeing your code, I would have no idea why...

Or


read var1 var2 junk << !
$(sed -n '2p' file1)
!