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Hello all,

Happy turkey day! I have no questions at this time.

...it's 50 picks at a time, but repeat 1000 times, like re-shaffle and re-pick and so on.

Dear Masters,

Is there an easy way to generate a random list from a give list of names? Let's say, I have a file containing 15000 city name of world(spreadsheet, names in the first column), I...

Hi

Your code works perfect, but still a problem left. It cannot distingush GENE4, GENE411, GENE4114X. If I ask for GENE4, then it will return all GENE4, GENE411, GENE4114X.

Thanks

Hi All,

My question is if the simple but powerful shell scripts can extract data from a big data file by using a list of identifier. I used to put everything in the database and do joining, which...

Is there a better place to post Mac or Java questions?

Thank you so much. That will do.

Is this dell box installed windows system before? I guess, just guess no experience with this, you need to reformat your system disk and reinstall your linux.

Hello Masters,

I have a java upgrate problem with Mac OS X system. I have upgrated the Java from 1.4.2 to 1.5 by downloading the package which Apple provided. But it doens't seem to work well....

Thank you all. Both of your code generated almost same output in terms of line breaks, second code didn't work with multiple redundent lines.

First output,
AA001897 SPTA1
AA001918 MI-ER1^M ///...

Thanks! You are right. So I am fraid of violating rules again. But the basic idea is,

H82421 RDH11
H82421 DKFZP564M1462
H82435 BAGE4
H82435 MLL3
H82527 C20orf17
H82532 -
...

Hi Masters,

Here is the code someone posted days ago, but it didn't work well because it did't omit the newline character when $2 conbines. Can someone help me out?

awk '{if($1==prev) printf("...

Hi Masters,

I am runing a java application on Mac os x10.4, java version 1.5. I had this errors regarding chinese language issue. Could anyone have a hint? Thanks a ton.

> java -classpath...

yes, it generated output of environmental variables, such as:
ENV=
HOME=
IFS=

It gave an error as:
:bad interpreter :no such file or directory

In your code, I changed #! /usr/bin/ksh to #! /bin/ksh because I found the ksh is in /bin. The error insisted with changing echo...

Thank you all very much.

For Perderabo: Yes, Mac OSX has all the Unix shells including ksh under the bin directory. Basically, Mac OSX is a freeBSD unix system. Anyway, your code worked perfectly...

Perderabo's code worked very well in solaris environment, but did work under Mac OSX. Any suggestions? Thanks so much.

Thank you both masters. I will test it out.

For Abhishek Ghose, The fields with in each section are tab delimited. Between the section are ___________.

Thanks again.

No. The original file was,

empty empty record record for #5
record record empty empty for #7.

When I posted the records, the empty spaces were missed. But it should be extracted as a empty...

Hi Masters,


___________________________________________________________________________________
Group of orthologs #1. Best score 3010 bits
Score difference with first non-orthologous sequence...

in the output file for each line record must match very well, even though some of session doesn't have a GN line. In such case, ID has to match to empty record. Thanks.

my bad! I misspelled word. Thanks.

Hi,
It didn't work for some reason. error is
awk: syntax error at source line 1
context is
/^ID/ {print $2} test.tmp > >>> ID <<< .tmp
awk: bailing out at source line 2
paste:...

Hi Masters,

I knew this isn't a new issue, but couldn't find any similar threads. So, I have to bother you. Here is my input file (genomic data). The file has many sessions, each session seperated...

it worked! thank you so much. but only one problem left, some of the record being changed. for example,

input record c2 is mad1///mad2///mad3 (one record), output is mad1, ///, mad2, ///, mad3...