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Search: Posts Made By: janshamsani
2
1,246
Posted By janshamsani
thank you. I worked
thank you. I worked
2
1,246
Posted By janshamsani
Grep
hi,

I'm trying to grep lines that match my term "./.' in a column

The column contains items such as:

0/1:12:3,5,2,2:.:0.3333:2:1:VarscanHighConfidence:.:.:.
./.:.:.:.:.:.:.:.:.:.

in...
1,769
Posted By janshamsani
Problem to grep contents from a file
hi,

I'm trying to grep content from one file in another file.

The file that I'm searching into is large and hence I need to temporarily unzip it first.

gzip -dc...
3,064
Posted By janshamsani
Hi, The code works perfectly. Thank you
Hi,

The code works perfectly. Thank you
3,064
Posted By janshamsani
awk colon separated items
Hi,

I need to filter my data based on items in column 23. Column 1 until column 23 are tab separated. This is how column 23 looks like:

PRIMARY=<0/1:504:499,5:.:.:.:0.01:1:15:.>

I want to...
1,621
Posted By janshamsani
Hi, Thank you, the 4th code worked for me....
Hi,

Thank you, the 4th code worked for me. No this is not a homework. Im a PhD student in cancer research and I'm analyzing sequencing result which is very big and normally excel would not be...
1,621
Posted By janshamsani
awk on multiple colums
HI,

I need to filter my data based on 3 different columns.

Two of the columns are unique so it worked if u use something like

grep 'PASS.*HIGH|HIGH.*PASS' file.tsv


However the...
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