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thanku sir its working :) :) :)

then how can i resolve it?

entering and leaving directory.... this is the biggest error .......... sir due to this i am not able yo run any software because whenever i install any software i ever got the same message leaving...

csm@csm-HP-Z420:~/Desktop/microtar-0.9.6$ sudo make install
Making install in ViennaRNA-1.7.2
make[1]: Entering directory `/home/csm/Desktop/microtar-0.9.6/ViennaRNA-1.7.2'
Making install in lib...

I got every time the same error leaving directory [2] etc when i install any software. I put up the command and the error below, kindly help me out so i could proceed.


csm@csm-HP-Z420:~$ cd...

i am just not able to install it because i am not able to pick out the problem.
i never ever face this type of proble before while installing any software :(:confused:

sir, this reply is quit confusing for me, is there any easy understandable way so that we can resolve this?

---------- Post updated 10-07-15 at 01:55 AM ---------- Previous update was 10-06-15 at...

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by miRanda configure 3.3a, which was
generated by GNU...

csm@csm-HP-Z420:~/Desktop/miRanda-3.3a$ ls /usr/share/mi[rR]*
ls: cannot access /usr/share/mi[rR]*: No such file or directory
csm@csm-HP-Z420:~/Desktop/miRanda-3.3a$

how can i check it sir? i am using ubuntu 14.0

csm@csm-HP-Z420:~/Desktop/miRanda-3.3a$ ./configure --prefix=/usr
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for...

csm@csm-HP-Z420:~/Desktop/miRanda-3.3a$ ls -ld /usr/local/share/man/man1
drwxr-xr-x 2 root root 4096 Oct 1 12:14 /usr/local/share/man/man1
csm@csm-HP-Z420:~/Desktop/miRanda-3.3a$ ls -l...

I have tried this also.... problem remains same...

Hi, i have a question, when I install any software it give error message like as follow :


sudo make
[sudo] password for csm:
make all-recursive
make[1]: Entering directory...

Thanku all I am working very smoothly with your scripts!!! :)

csm@csm-HP-Z420:~/Desktop/sequences/sequences to extract for fold$ awk 'FNR==NR {T[$1];next} $1 in T {P=NR+1} NR<=P' only_ids.txt sequences.fasta > hkm
csm@csm-HP-Z420:~/Desktop/sequences/sequences...

it is showing cannot open file1

---------- Post updated at 12:23 AM ---------- Previous update was at 12:18 AM ----------

csm@csm-HP-Z420:~/Desktop/sequences/sequences to extract for fold$ awk...

no output is generated by this script...

hey!!! I have 2 files file1 is as ids.txt and is

>gi|546473186|gb|AWWX01630222.1|
>gi|546473233|gb|AWWX01630175.1|
>gi|546473323|gb|AWWX01630097.1|
>gi|546474044|gb|AWWX01629456.1|...

query_id subject id s. start s. end
3453 gi|546669925|gb|AWWX01450616.1| 282 305
5676 gi|546671471|gb|AWWX01449637.1| 771 790
8765 gi|546669842|gb|AWWX01450698.1| 1523 1542...

hello sir, i am getting good results with this script, but what if i want to extract another col from file2 followed by seq_id column?

---------- Post updated at 05:47 AM ---------- Previous...

i am trying to run :)

cragun sir, how to run this command from terminal ? i mean i need to save it with .awk extension or to paste these lines directly into the terminal? i did do the later but it shows infinite loop.
...

yes it seems it is working. Thanku very very much Sir indeed!!!!!!! :) :)

yes Rudic sir i want exactly this format but why it is chopping off character which i have marked as *

...