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How to Copy non-empty files into subdirectory

I have directory A

there are bunch of files: a.txt a.txt.target b.txt b.target.txt.......

How can i find out the non-empty file within...

Thank you so much!But is it perl or shell script? I am sorry for the easy questions. I usually working on Perl, but it is not like the regular one. How can I run it? Run under the linux command line?...

I want to printing into two files under difference situation.
For example, file 1 name.txt
>gma-miR172a Glyma02g28845
>gma-miR1513a-3p Glyma02g15840
>gma-miR166a-5p Glyma02g15840...

I want to delete partical duplicate file

>gma-miR156d Gm01,PACID=26323927 150.00 -18.28 2 18 17 35 16 75.00% 81.25%
>>gma-miR156d Gm01,PACID=26323927 150.00 -18.28 ...

I want to replace lines. The files 1 are (separated by \t)
Gm01 phytozome9_0 three_prime_UTR 70641 70759 . - . ...

I want to do
perl genome.gff 1.txt > 1.gff

there are multiple files for 1.txt; 1_1.txt.....3_4.txt,
how can i generate 1_1.gff......corespondingly? Thank you

How can I run the following command on multiple files and print out the corresponding multiple files.

perl script.pl genome.gff 1.txt > 1.gff

However, there are multiples files of 1.txt, from...

How can I Run one script on multiple files and print out multiple files.
FOR EXAMPLE
i want to run script.pl on 100 files named 1.txt ....100.txt under same directory and print out corresponding...

Do i need to put it in my perl script?
Or it is a linux command?
Sorry for the silly question.
And I want to generate output file name according to the file in A
such as
perl script.pl...

Hi

I have 100 files under file A labled 1.txt 2.txt.....100.txt(made up name)
I have 1 files under file B labled name.txt

How can i run the same perl script on 100 files and file name.txt

I...

Thank you so much! That works. OMG, I spent almost half of day doing this, thank you so much again!

Hi guys
I am newbie in using linux, how can i Separate file into multiples linux. I want the lines with same parent and id numbers print out into same files.
For example
Gm17 5135289 5136789 . ...