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Hi
My input file looks like this:

>BAHMI01000090.1 Details of the shopping list 9800 item00090, whole set of listed artifacts and objects
>BAHMI01050012.1 Details of the shopping list 9800...

I was trying to create a tar.gz file.
Ya I was trying to create one

Hi
I wanted to tar and gunzip a file named backup

tar: backup.tar: Wrote only 2244 of 10240 bytes
tar: Error is not recoverable: exiting now

Please tell me what I am doing wrong?

Please...

Hi Rudic,
I used this command
awk '$3 ~ /RA|NGS/ {next}' file > newfile

but it gave me th new file of 0 data. Is it becoz there is an occurance of RA and NGS at a position other than 3rd...

Awesome~~
THANKS:):b:

Hi

This is a sample of my data file.

##field PH01000000 1 4869017
#PH01000000G0240
WWW278545G0240 P.he_model_v1.0 erine 119238 121805 . - . ...

I used :
"delete from tablename
where seq_id = 'seq2'
i deleted all the other sequences.

and after that
delete from tablename
where stop_id>=1000000 ;

i dont know how to reduce the...

Hi,

I thought about it and realized that i could delete all unwanted entries in the mysql databaseb by using a select and delete command
i want to retain only those seq1 entries whose stop_id is...

Hi All

This might be a weird query but its related to deleting specific details in database.

Bascially I had built a database using a set of files
seq1 of 300 mb
seq2 of 200 mb
seq3 of 350...

yaa it was a typo error from my side..

thankyou all it worked!!! :) :)

I have a sequence which looks like this:

>string20525 107143
AWEELWKEKEGEHRWDDEDWDWQWJKIDDDDFDEFJERIJVJFBGNJGTHGFBLMFGLNHBFJTRJRSKWSNEJDDJIWWYSYAQQHQKSKDJKTIVVKTKBVKBKBKVKFKKK
>string1870 398197...

Thanks for commands !! It worked :) though I myself was unclear with my question!!
Thanks a lot!!

Hi All.
I didnt know how to put this question as but i want to delete my values following string_X but need to retain the data in it.
I hope the following might help me in conveying my doubt.
My...

Thanks bipinajith for the spot on answer!!
Thanks Adhi and Scott for insight!! :)
:) :D

Sorry for the confusion.
What I meant to say was I had a directory named backup and I wanted that directory in format as
backup.tar.gz

I used gunzip directly but it gave me an error

gzip:...

Hi All

This is very basic query but I have a huge folder named backup that I need to transfer.

What is the command to convert the file in format backup.tar.gz so that I could transfer the...

worked!! :)

Thanks!!it worked!!! :)
:)

Hi All,
I had a query related to sql select update replace command.

i have a table named clusters and it looks like this

name model characteristics
sample1.1 ...

Thanks it worked!!

Hi

I have a number of sequences and a string occurs a number of times in that sequence.

How can I select and replace only those strings which are followed by \tab.

for eg :
my sequence ...

Hi
Thanks for the insight!! My file has a number of sequences inside it and it starts by annotation as shown.Also string doesnt have space before numbering.
thefile looks like this:

>string1...

Hi I tried using this but it sorted it in a order like this
>string 1
>string 100
....
>string 109
>string10
>string110
...
>string 119
>string11.

it rearranged in a different order.
I...

Hi,
I have this single file with a number of sequence inside it of format

>string1
data
>string100
data
>string10
.....
>string5
...
>string67
......

the dots represent data.

I...