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I was trying to implement part of your suggestions but ended up with a blank Results file. Here is what I am using:

time tr -cs "[:alpha:]'" "\n" < $1 | grep -v -f blacklist.txt | sort | uniq -c...

Uff da! Quite a bit of code there; thanks for taking the time to put that together.

If the task of figuring out capitalization is ignored, is there something else you might suggest to handle...

I am trying to count the occurrences of ALL words in a file. However, I want to exclude certain words: short words (i.e. <3 chars), and words contained in an blacklist file. There is also a desire...