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I have a file called part1.pdb...contents are:

ATOM 1 N SER 1 -10.295 -8.909 10.913 1.00 0.00
ATOM 2 H1 SER 1 -10.230 -8.214 10.183 1.00 0.00
ATOM 3 ...

thanks 4 so much help

---------- Post updated at 11:39 PM ---------- Previous update was at 12:01 AM ----------

I did something like this...
for i in *.pdb; do sed -n '1,/TER/q;p' $i >...

about 200 files with names as
11_0.pdb
11_60.pdb
12_12.pdb
14_180.pdb

are there in my library...I need to rename all of them by addinf File in front of them as:

File11_0.pdb
File11_60.pdb...

i know that a pattern can be matched by grep...like grep "pattern" file...but i dont know how to get next lines after matching pattern

there are 200 files named file1_0.pdb,file1_60.pdb etc....it looks like:

ATOM 1 N VAL 1 8.897 -21.545 -7.276 1.00 0.00
ATOM 2 H1 VAL 1 9.692 -22.015 -6.868 ...

@Skrynesaver, i used the code. It removes only TER and not line before it (ATOM 2518 OXT VAL 160 7.646 12.461 -0.386) and not even3 lines after the immediate line after TER i.e
(ATOM 2520 H1 VAL...

I have file that looks like:
ATOM 2517 O VAL 160 8.337 12.679 -2.487
ATOM 2518 OXT VAL 160 7.646 12.461 -0.386
TER
ATOM 2519 N VAL 161 -14.431 5.789 -25.371
ATOM 2520 H1 VAL 161...

This doesnot work...Space is still there

hey,
I have this file:

ATOM 2510 HG12 VAL 160 8.462 15.861 1.637
ATOM 2511 HG13 VAL 160 9.152 14.510 0.725
ATOM 2512 CG2 VAL 160 6.506 16.579 -0.088
ATOM...