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How unix file can be put in the hash table and how to write a program in which the chunk server acts as a client and server .
Can you give me a comprehensive idea of implementation.

Sir, I am new to shell scripting. I request you to help me for this.
I have the data file in the given format. In the given file, 3 structures are there starting with’Contig’and each structure...

Respected Sir,
I added some lines to the process and executing. My input file contains 5000 sequences. This program executing 1020 times. after that it is giving awk : 6: fatal error. Modification...

I am executing the following script using 'awk -f process.awk out' where 'out' is the input file which consists of 5000 sequences. Each time it takes one sequence, run the below program by creating a...

Sir, I have a big datafile in the given format. I have to extract the lines which are starting with ‘Chr’ followed by number like ‘Chr5’, ‘Chr25’ etc. and fix the range for each line by subtracting...

The optimized code t2prog is executed. When I am working with real datasets it consists of additional data values in the tag like <secondary-structure-display> .....</secondary-structure-dispaly>...

Dear Sir

I used the second code using Parse T1 and Parse T2. After execution of that code output files 't1out' and 't2out' are generated in sub directories 'dir1' and 'dir2' but final output is...

The two shell scripts (t1prog and t2prog) are given below they are working fine. The input for the first program is 't1.det' and for second program is 't1.rnaml'. These two input files are in 'dir1'...

I made modification as 'case $(echo $A) in' in script. Output is ok except '-e'. -e has to be removed. It is coming before every dG number i.e., -25.40, -25.10, etc. How it is coming I am in...

I made corrections in the program as you suggested. It giving the output like this; It is not printing the dg number for all structures and Hairpin loop heading from the second structure.

Output...

I made corrections in the program as you suggested. It giving the output like this; It is not printing the dg number for all structures and Hairpin loop heading from the second structure.

Output...

I modified as u suggested but it giving error like this
t2prog: line 21: syntax error near unexpected token `('
t2prog: line 21: ` done <($INFILE)'

Modified program is given here
...

In line3 of the program I placed the file name as

INFILE= sai (here sai is my input file)
and run the shell program with 'sh t1prog'

it is giving error as
line 21: $INFILE: ambiguous...

shell scripting
From the given input file i want the output (shown below) which is the values of statements starting with Haripin loop and Muti-loop in each structure with its dG no. In input file...

Hai ! I am doing a research on Bioinformatics and a part of the code in perl have to be converted to shell scripting. I am new to shell programming. Pls. kindly help me to convert this code to shell...

KINDLY HELP ME FOR SHELL SCRIPTING FOR THIS TASK.

My input file consists of thousands of sequence in this format. The given input file consists of four sequences which are starting with ‘>’...