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Search: Posts Made By: EinsteinMcfly
1,195
Posted By EinsteinMcfly
Understanding someone else's csh script...
Hello all. I suspect this will be a simple case for an experienced csh scripter, but google is getting me nowhere on this one.

I'm trying to get someone else's set of scripts to work for me, and...
12,493
Posted By EinsteinMcfly
Thanks very much guys! That works perfectly.
Thanks very much guys! That works perfectly.
12,493
Posted By EinsteinMcfly
recursive copy into a directory and all its subdirectories...
I want to copy a file from the top directory into all the sub-folders and all of the sub-folders of those sub-folder etc. Does anyone have any idea how to do this?

Thanks in advance of any help...
4,982
Posted By EinsteinMcfly
How would I know if this is the case?
How would I know if this is the case?
4,982
Posted By EinsteinMcfly
The commented line should not be commented. This...
The commented line should not be commented. This is what my LIBMPI was set to. I tried it both with the .so file in the path and without and got the same error message.
4,982
Posted By EinsteinMcfly
How do I find the correct environment variables for MPI?
Hello all. I've been trying to install NWCHEM in parallel on a new cluster, and have been able to get it to work on single processors by ignoring any MPI environment variables.

This is, of...
14,795
Posted By EinsteinMcfly
Thanks very much for your help. It's working...
Thanks very much for your help. It's working well.

cheers
EMF
14,795
Posted By EinsteinMcfly
How to use grep to get only part of a line...
Hello All. I have an output file which contains the phrase "Total DFT Energy =" and then a number. This occurs many times in the output file, and what I want is to pipe the numbers (which are all...
6,176
Posted By EinsteinMcfly
That worked! Thanks so much! You've made my job...
That worked! Thanks so much! You've made my job 1000% easier.

Cheers,
EMF
6,176
Posted By EinsteinMcfly
Does anyone have any other ideas about where I...
Does anyone have any other ideas about where I might look for answers to this question? I had always assumed that the problem would end here and that someone on this board would know the answer...
6,176
Posted By EinsteinMcfly
When I put set -x in there properly as you say,...
When I put set -x in there properly as you say, it gives the following for the lines where I specify the path and try to execute nwchem:
+...
6,176
Posted By EinsteinMcfly
I create all of the directories and then write...
I create all of the directories and then write the input file in that directory under the name $basis_name$func_name$spin_name".nw", then try to run the program by outputting
>> nwchem...
6,176
Posted By EinsteinMcfly
Yes, the path comes back...
Yes, the path comes back /opt/local/share/nwchem/nwchem. Does this tell anyone anything about why I can't just use it in the .sh script the same way I do other (more standard) commands?

Thanks...
6,176
Posted By EinsteinMcfly
how to run non-standard commands in bash script?
Hello All. I suspect that this will be a clear noob question, but I haven't been able to figure it out using the usual methods, so I turn to you.

I've written a script to create input files for...
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