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I found the solution, it was to source the profile I wanted before the command! :-

ssh 172.24.40.100 "source /root/.bash_profile; /scorpion2/start.shCheers

works as expected

[a ~]$ ssh 172.24.40.100
Last login: Mon Jan 1 06:07:24 2001 from 172.24.41.78
[b ~]# /path/script.sh

gives me error consistent with env setup

[a ~]$ ssh 172.24.40.100...

And GCC under Cygwin is?

I have two headless servers I am writing code for, and a Windows box networked with them.

I want to compile my code within an IDE on the Windows box (eclipse most likely) and run the compiled...