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Thank you for the start to the code. I should be able to take it from here.

And to KevinADC...I apologize for the annoyances of asking for so much code. I am enrolled to take a more advanced...

Hi all,

Using Perl, I need to extract DNA bases from a GenBank file for a given plant species. A sample GenBank file is here...

Nucleotide (http://www.ncbi.nlm.nih.gov/nuccore/NC_001666)
...

Hello all,

I'm doing some research in Biostatistics this summer studying chloroplast genomes. I have 19 text files that look exactly like this:

Name: Marchantia polymorpha
FileName:...

Hi again tyler_durden,

This code is working great for all the files I have tried it on so far. Thank you...it helps more than you know. I had a couple quick questions:

(1) This again...

(1) Name: _________ -- something like "Acorus Americanus"
(2) for situation (3) gene (151670..151951)
(4) gene -(96591..97384, 69098..69211)
(5) ...

Hi tyler_durden,

Well, what's going on is I have over 100 GenBank files, each is it's own NC_ number...(this NC number is just a way to catalogue them). I want to be able to give that NC_...

Hey guys,

I'm doing some Perl scripting for genomic data out of GenBank files...I have to extract the name of the plant, the file name, the number of bases, and all of the genes including their...

Hey thanks guys. KevinADC, I just tried your code and it worked great, but could you put up what exactly you were thinking when you put it together. Just wanted to know as a learning experience. I...

#!/usr/bin/perl
my $data_file = 'genomehtml2.txt';
open DATA, "$data_file" or die "can't open $data_file $!";
my @array_of_lines = <DATA>;
foreach my $line (@array_of_lines)
{
if ($line =~...

Hello. I've been writing some code in Perl to read in strings from html files and have been having issues. In the html file, each "paragraph" is a certain file on the website. I need to find every...