Search Results

Hello folks,
I have multiple occurrences of the pattern:

)[0-9].[0-9][0-9][0-9]:

where [0-9] is any digit, in various text context but the pattern is unique as this regex. And I need to...

Thanks indeed - you helped a lot. Cheers

Thanks for help: works fine!
Except in cases where a string is a substring of another one in file2 (eg, BACILLUS_Bacilli_ is a sub of LACTOBACILLUS_Bacilli_), in which cases there are leftovers...

Thanks a lot, but this awk solution deletes from file1 only some part of the strings specified in file2.. why would it not recognize the rest?..
I'm attaching a small example of files 1 and 2, and...

Hello guys,

should be a very easy questn for you:

I need to delete strings in file1 based on the list of strings in file2.

like file2:
word1_word2_
word3_word5_
word3_word4_...

rdcwayx, thank you very much, I'll test this on large data.

People, I need your help with making a script which will

1. take as an input the number of lines, smth like this:

((RUBROBACTER_1_PE1288
(((SALINISPORA_1_PE1863
SALINISPORA_1_PE1828)100...

rdcwayx & konsolebox, thank you very much indeed. konsolebox: may I ask what is the safety from considering the underscore? U think otherwise awk may over-replace in some cases?

sed is a powerful thing, i have this page in bookmarks :), thanks
But still my lines to replace are many more..

I guess this is an ad hoc suggestion, which will not do ( as the replacement table is hundreds and the input file - thousands of lines.

Example input and output would be like the attached. The table would be used to identify and replace the strings..

Dear all thanks for helping in advance.. Know this should be fairly simple but I failed in searching for an answer.

I have a file (replacement table) containing two columns, e.g.:
ACICJ...

Cheers everyone!
I have a particularly similar need to count occurrences of words. The detail is that the words are many and are contained in ahother file.

Perl experts, can u pls tell if it's...

thank you! - works perfect

Dear Franklin, thanks for helping.
While the prevous version of your command eat up the string up to the last occurrence of the colon, this one does not seem to affect the file at all.
Files may...

thanks- really unix is elegant

-----Post Update-----



Hey, here i'm again:
it seems in strings where there are more than one ':' after the name (in this case, AQAEO) this command eats up...

the original string would be

....1.08305,((THDEA1_1_PE708:0.47029,...

and, provided that I know the name THDEA,

the line would become 1.08305,((THDEA:0.47029,

The name is known every...

Dear all, will appreciate your help with this (supposedly simple) thing.
How to use sed to replace a part of string like this:

(TAGthenwhatever:

into (TAG:

meaning that '(TAG' (known,...

Hey everyone, lots of thank for your helps with the bacterial business! Works charmingly.

Hello all. I would need to "grep" a file for the occurrence of all lines listed in another file. The result would be a list of lines extracted from file 1, which contain instances (lines) present in...

Dear all, will be grateful for your advices..
The need is (i guess) simple for UNIX experts. Basically, there are replacement tables, which would be used to replace text strings in the data (large...

Gorgeous :) i love unix. Many thanks!

Guys, can you pls help?.
My need is to find a string in a line, cut it and append to the end of the line where it was found. I guess the sed command can handle this, but how?..

e.g. in the line...

Dear experts!

can you please advise if there are good solutions to emulate Unix on a vista PC? I'm on windows by default, as many on my crucial applications are exclusively win-based, so...

not that little, somewhat emotionally unbalanced )) but with mostly assembled genome )

oh, this ssh client thing..