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Hi,

I have thousands of files in a directory that have the following 2 formats:

289620178.aln
289620179.aln
289620180.aln
289620183.aln
289620184.aln
289620185.aln
289620186.aln...

That works!!

Thanks so much- :)

cheers!

Hi,

I'm working with :
GNU sed version 4.1.2

Thanks!

Thanks for your help-
I get the following error :

sed: -e expression #1, char 4: unknown command: `$'

Hi,

The following sed command is not working for me, does anyone have a good alternative for joining lines in a file based on a match?

# if a line ends with a backslash, append the next line to...

Thanks again for your help!

I don't have nawk- but, using awk I still get the following output:
PADG_04289

Any suggestions on how to get the output: (Maybe someone who knows Perl?) ...

PADG_04287,PADG_02886,PADG_07699 should be in the output because PADG_02886 is
in files 1 and 2.

Thanks for your help!

I don't have nawk- but, using awk I got the following output:
PADG_04289

Any suggestions on how to get the output:
PADG_01010,PADG_04292...

Hi,

I have two files that I need to match patterns with and the second file has comma delimited rows of data that match but I'm having trouble getting a script to work that gives me the match...

Thanks so much! It worked but, only returned one of the matches between file 1 and 2 , and I know there are many more. Any idea why it's not returning all of them?
Thanks again

Hi,

I have two files:

file 1 has a list :

ABC_1024
ABC_4507
ABC_5589
ERT_4389
DDB_5507

file 2 has an array:

ABC_1011,ABC_1024,ABC_5670 DDB_4567 ERT_2345 January08
ABC_9099 ...

I think I should explain a little more...
I want to exclude cases where there is information in all three columns (ie. BBB_0123 BVG_0895 BSD_0987 straight across) and only keep lines that have gaps...

I think I should explain a little more...
I want to exclude cases where there is information in all three columns (ie. BBB_0123 BVG_0895 BSD_0987 straight across) and only keep lines that have...

Hi ,

I have 5 columns total and am wanting to search lines in columns 3-5 and basically grep -v patterns that match 'BBB_0123' 'BVG_0895' 'BSD_0987'

Does anyone know how to do this? I tried...