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Yes I did put ">" in. Sorry I forgot to post that.

Hi, as the title, I have an array @f_lines with gene information in it. How can I put the content of @f_lines into a file so that I can read it?

I tried this:
open(OUTPUT, "file"); # put gene...

Does the "grep -vf file1 file2>tmpfile" mean move the the lines in file2 that are not in file1 to tmpfile? I don't need those that don't match.
What does the the first line mean?
Thanks very much.

Thanks Joey. But I need to compare all the transcript id in file1 and file2, so I need to use some loops. I'm quite new to perl, could you please give me more details about the codes?

Hi guys,

As the title, I want to take out the lines in file2 if the TCONS_* matches that in file1. Then put the lines in a file3. The TCONS numbers ranges from TCONS_00000024 to TCONS_00381684....