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Sorry I was a bit quick to say it doesn't work, having a play around on excel i have managed to allign the collumns and the items at the top are specified perfectly by the condition, which is what...

Thank you, that one does work a lot better!

I think the issue is that the way my raw data has been exported, it is not properly alligned in collumns itself, so when i run the script it does not...

As in this is the output i get:
subjects AF3_Li..nce AF4_Li..nce AF7_Li..nce AF8_Li..nce C1_Lin..nce C2_Lin..nce C3_Lin..nce C4_Lin..nce C5_Lin..nce C6_Lin..nce CP1_Li..nce CP2_Li..nce CP3_Li..nce...

Thanks, I can run the script now and save the output however the script does not appear to be doing what I wanted and what you managed to get it to do!
Can you suggest what I may be doing wrong or...

Thank you so much for this, it looks like it will be a great help!

Is there any way of getting the output to save in a file, so I can open it and run my analysis?

Thanks!

I have to create a Perl script which will transpose the data output from my experiment, from columns to rows, in order for me to analyse the data.

I am a complete Perl novice so any help would be...