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1. UNIX for Dummies Questions & Answers
Hi
I'd say I'm having this weird problem where my script isn't taking the value off a variable or printing it. My code is like this:
set count_C= `grep -c C mols`
set count_H= `grep -c H mols`
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2. Programming
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using namespace std;
class B;
class A{
public:
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... (1 Reply)
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3. Programming
I have the following code and getting the compilation errors
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4. UNIX for Dummies Questions & Answers
Hi All,
I have a trivial question but I dont know how to solve it.
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5. UNIX for Dummies Questions & Answers
I have defined this alias as quick way to find out which mount point to use for a USB drive after inserting it:
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6. UNIX and Linux Applications
I am running the example from the following webpage:
MySQL :: MySQL 5.0 Reference Manual :: 12.1.11 CREATE TRIGGER Syntax
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Is it possible to send a custom signal to a process?
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I am new to PHP and UNIX. I am using Apache to do my testing on a Windows Vista machine.
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<?php
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9. Shell Programming and Scripting
Hey all, I was wondering if someone would take a look at this script I'm working on. I don't know if i have the syntax correct for my variables and if the for loop is written correctly.
any assistance would be greatly appreciated.
#!/usr/bin/bash
###########################################... (12 Replies)
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10. UNIX for Dummies Questions & Answers
I'm trying to define a variable named sin
I already have a variable named cos, which has the value "hello"
I want sin to have the value of "hellothere",
so sin would be something like
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but I'm not sure that I know the syntax.
Can anyone help?
:confused: (4 Replies)
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Bio::TreeIO::svggraph(3pm) User Contributed Perl Documentation Bio::TreeIO::svggraph(3pm)
NAME
Bio::TreeIO::svggraph - A simple output format that converts a Tree object to an SVG output
SYNOPSIS
use Bio::TreeIO;
my $in = Bio::TreeIO->new(-file => 'input', -format => 'newick');
my $out = Bio::TreeIO->new(-file => '>output', -format => 'svggraph');
while( my $tree = $in->next_tree ) {
my $svg_xml = $out->write_tree($tree);
}
DESCRIPTION
This outputs a tree as an SVG graphic using the SVG::Graph API
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Brian OConnor
Email brian.oconnor-at-excite.com
CONTRIBUTORS
Allen Day Guillaume Rousse, Guillaume-dot-Rousse-at-inria-dot-fr
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::TreeIO::svggraph->new();
Function: Builds a new Bio::TreeIO::svggraph object
Returns : Bio::TreeIO::svggraph
Args :-width => image width (default 1600)
-height => image height (default 1000)
-margin => margin (default 30)
-stroke => stroke color (default 'black')
-stroke_width=> stroke width (default 2)
-font_size=> font size (default '10px')
-nomalize => undef or 'log' (default is undef)
write_tree
Title : write_tree
Usage : $treeio->write_tree($tree);
Function: Write a tree out to data stream in newick/phylip format
Returns : none
Args : Bio::Tree::TreeI object
decorateRoot
Title : _decorateRoot
Usage : internal methods
Function:
Example :
Returns :
Args :
next_tree
Title : next_tree
Usage :
Function: Sorry not possible with this format
Returns : none
Args : none
perl v5.14.2 2012-03-02 Bio::TreeIO::svggraph(3pm)