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Forum: UNIX for Beginners Questions & Answers 02-11-2020

awk script to extract transcript information from gff3 file

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awk ' (! h++) {print "transcript_id",...

awk '
(! h++) {print "transcript_id", "gene_name", "description", "chromosome", "strand", "transcript_start", "transcript_end", "gene_start", "gene_end";}
$9 ~ /ID=.*Name=/ {n=$9; sub(".*Name=",...

Forum: UNIX for Beginners Questions & Answers 02-11-2020

awk script to extract transcript information from gff3 file

4,610

Posted By

awk ' (! h++) {print "transcript_id",...

awk '
(! h++) {print "transcript_id", "gene_name", "description", "chromosome", "strand", "transcript_start", "transcript_end", "gene_start", "gene_end";}
$9 ~ /ID=.*Name=/...

Forum: UNIX for Beginners Questions & Answers 01-29-2020

awk Script

3,352

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How about reading (, understanding), and...

How about reading (, understanding), and following / answering post #3?

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