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Forum: UNIX for Dummies Questions & Answers 10-24-2013

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Try:nawk...

Try:nawk 'NR==FNR{a[NR]=$0;next}/^>/{$0=$0""a[++i]}1' cluster_sizes.txt rep_sequences.fasta

Forum: UNIX for Dummies Questions & Answers 10-24-2013

1,946

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An awk approach:
awk 'NR==FNR{A[++c]=$0;next}/^>/{$0=$0 A[++j]}1' cluster_sizes.txt rep_sequences.fasta

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