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Your variables are numbers.

if [ $Tgt_count -eq $Source_Count ] ; then
echo "Source Record Count is EQUAL to Target Record Count"
exit 0
else
echo "Source Record Count is NOT EQUAL...

#!/bin/ksh

Src_Path="/mac/dev/Generic/SrcFiles"

line_count=$( wc -l < "${Src_Path}/FILE_JUNE.txt" )

echo "Record Count of FILE_JUNE.txt is : $line_count"