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bio::graphics::glyph::primers(3pm) [debian man page]

Bio::Graphics::Glyph::primers(3pm)			User Contributed Perl Documentation			Bio::Graphics::Glyph::primers(3pm)

NAME

       Bio::Graphics::Glyph::primers - The "STS primers" glyph

SYNOPSIS

	 See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

DESCRIPTION

       This glyph draws two arrows oriented towards each other and connected by a line of a contrasting color.	The length of the arrows is
       immaterial, but the length of the glyph itself corresponds to the length of the scaled feature.

   OPTIONS
       In addition to the common options, the following glyph-specific options are recognized:

	 Option      Description	       Default
	 ------      -----------	       -------

	 -connect    Whether to connect the	 true
		     two arrowheads by a line.

	 -connect_color  The color to use for the    bgcolor
		     connecting line.

BUGS

       Please report them.

SEE ALSO

       Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::Graphics::Glyph::arrow, Bio::Graphics::Glyph::cds, Bio::Graphics::Glyph::crossbox,
       Bio::Graphics::Glyph::diamond, Bio::Graphics::Glyph::dna, Bio::Graphics::Glyph::dot, Bio::Graphics::Glyph::ellipse,
       Bio::Graphics::Glyph::extending_arrow, Bio::Graphics::Glyph::generic, Bio::Graphics::Glyph::graded_segments,
       Bio::Graphics::Glyph::heterogeneous_segments, Bio::Graphics::Glyph::line, Bio::Graphics::Glyph::pinsertion, Bio::Graphics::Glyph::primers,
       Bio::Graphics::Glyph::rndrect, Bio::Graphics::Glyph::segments, Bio::Graphics::Glyph::ruler_arrow, Bio::Graphics::Glyph::toomany,
       Bio::Graphics::Glyph::transcript, Bio::Graphics::Glyph::transcript2, Bio::Graphics::Glyph::translation, Bio::Graphics::Glyph::triangle,
       Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

AUTHOR

       Allen Day <day@cshl.org>.

       Copyright (c) 2001 Cold Spring Harbor Laboratory

       This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.  See DISCLAIMER.txt for
       disclaimers of warranty.

perl v5.14.2							    2012-02-20					Bio::Graphics::Glyph::primers(3pm)

Check Out this Related Man Page

Bio::Graphics::Glyph::extending_arrow(3pm)		User Contributed Perl Documentation		Bio::Graphics::Glyph::extending_arrow(3pm)

NAME

       Bio::Graphics::Glyph::extending_arrow -- The "extending arrow" glyph

SYNOPSIS

       This is deprecated.  Use Bio::Graphics::Glyph::anchored_arrow instead.

DESCRIPTION

       This glyph was designed to show a segment that goes beyond the panel.  If the segment is contained within the panel, a vertical base is
       shown.  Otherwise, an arrow is shown.

       Also see the arrow glyph.

   OPTIONS
       See Bio::Graphics::Glyph::anchored_arrow.  This glyph has been deprecated.

BUGS

       Please report them.

SEE ALSO

       Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::Graphics::Glyph::arrow, Bio::Graphics::Glyph::cds, Bio::Graphics::Glyph::crossbox,
       Bio::Graphics::Glyph::diamond, Bio::Graphics::Glyph::dna, Bio::Graphics::Glyph::dot, Bio::Graphics::Glyph::ellipse,
       Bio::Graphics::Glyph::extending_arrow, Bio::Graphics::Glyph::generic, Bio::Graphics::Glyph::graded_segments,
       Bio::Graphics::Glyph::heterogeneous_segments, Bio::Graphics::Glyph::line, Bio::Graphics::Glyph::pinsertion, Bio::Graphics::Glyph::primers,
       Bio::Graphics::Glyph::rndrect, Bio::Graphics::Glyph::segments, Bio::Graphics::Glyph::ruler_arrow, Bio::Graphics::Glyph::toomany,
       Bio::Graphics::Glyph::transcript, Bio::Graphics::Glyph::transcript2, Bio::Graphics::Glyph::translation, Bio::Graphics::Glyph::triangle,
       Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

AUTHOR

       Originally by Shengqiang Shu.  Temporarily deprecated by Lincoln Stein.

       Copyright (c) 2001 Berkeley Drosophila Genome Project

       This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.  See DISCLAIMER.txt for
       disclaimers of warranty.

perl v5.14.2							    2012-02-20				Bio::Graphics::Glyph::extending_arrow(3pm)
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