debian man page for bio::graphics::glyph::heat_map_ideogram

Bio::Graphics::Glyph::heat_map_ideogram(3pm)		User Contributed Perl Documentation	      Bio::Graphics::Glyph::heat_map_ideogram(3pm)

NAME
       Bio::Graphics::Glyph::heat_map_ideogram - The "heat_map_ideogram" glyph

SYNOPSIS
	 See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>.

DESCRIPTION
       This glyph draws a chromosome ideogram using scored features instead of cytobands.  It is a hybrid of the heat_map and ideograms glyphs and
       accepts options for both.  A typical usage would be to pair this glyph with an aggregator that groups scored features such as blast hits or
       gene_density bins, etc with a centromere.  The result is a chromosome ideogram that has bands whose colors vary porportionate to the
       feature score.

   OPTIONS
       See Bio::Graphics::Glyph for a full explanation of standard options.

       See Bio::Graphics::Glyph::heat_map for an explanation of heat_map options.

       See Bio::Graphics::Glyph::ideogram for an explanation of ideogram options.

BUGS
       Please report them.

SEE ALSO
       Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD

AUTHOR
       Sheldon McKay <mckays@cshl.edu>

       Copyright (c) 2006 Cold Spring Harbor Laboratory

       This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.  See DISCLAIMER.txt for
       disclaimers of warranty.

perl v5.14.2							    2012-02-20			      Bio::Graphics::Glyph::heat_map_ideogram(3pm)