about HP-UX error exa_parm mismatch?

9 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Find Syllable count mismatch

Hello, I have written a syllable splitter for Pseudo English and Indic. I have a large database with the following structure Syllables in Pseudo English delimited by |=Syllables in Devanagari delimited by | The tool produces syllables in both scripts. An example is given below: ...

2. Shell Programming and Scripting

Need fix for rsync Error due to version mismatch

rsync --delay-updates -F --compress --archive --rsh='/usr/bin/ssh -t -a -x' /web/admin/Transfer/data/ user1@destserver1:/tmp/testf rsync version on sender server is:3.0.9 rsync version on sender server is:3.0.6 Linux sourceserver1 3.10.0-693.17.1.el7.x86_64 #1 SMP Sun Jan 14 10:36:03 EST...

3. Programming

Warning: pointer type mismatch

Hi all, I'm new programming in C, so I had the next message in my code: Dual.c:88:20: warning: pointer type mismatch in conditional expression : &clientSa.sin6.sin6.sin6_addr, Any help would be great #include <sys/socket.h> #include <netinet/in.h> #include <arpa/inet.h> #include...

4. Shell Programming and Scripting

Count mismatch in UNIX

Hi, I have a requirement like below. client is sending the .txt filles.In that file we have 10 records but when I execute the below command it is showing 9 records. klena20> wc -l sample_file.txt|awk '{print $1}' It is showing the output as 9 But in a file records are 10. I found...

5. UNIX for Dummies Questions & Answers

Ownership mismatch from solaris to linux

Hi all, I have NFS share that is being mounted on both solaris10 and RHEL5. The ownership of files is right on solaris box but not on RHEL5 box. I logged in as root and when i try to change ownership with group, i am getting following error. chown -R oracle dba <filename> chown:...

6. Ubuntu

device size mismatch after mounting

Hi, I have a created a logical partition sda5 in ubuntu server 9.0.4. which is Disk /dev/sda: 250.0 GB, 250059350016 bytes 255 heads, 63 sectors/track, 30401 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Disk identifier: 0x00053d78 Device Boot Start End ...

7. Shell Programming and Scripting

To find String mismatch

Hi, I have a doubt when searching files for the existence of a particular key. I have a property file has data with key and value pair like below and i call it as property file.ini here are the contents in File: popertyfile.ini location.property=2 agent.method=begin newkey=23 ...

8. UNIX for Dummies Questions & Answers

Interesting date/ps time mismatch

# date;ps -ef|grep confused. Tue Dec 13 11:11:22 EST 2005 root 12847 12733 0 11:21 pts/83 00:00:00 grep confused. I am really confused on why my ps and my date command are returning different values for the time. Anyone know how to resolve this? Running FC2, if it helps.

9. Solaris

X Keyboard Extension version mismatch

I want to use calls from the X Keyboard Extension, but get "library version mismatch" error. First one is XkbLibraryVersion(..). This one already returns false. Then I call XkbOpenDisplay(...) which does not return a valid display; return value is XkbOD_NonXkbServer. If I open the display with...

LEARN ABOUT DEBIAN

bio::align::pairwisestatistics

Bio::Align::PairwiseStatistics(3pm)			User Contributed Perl Documentation		       Bio::Align::PairwiseStatistics(3pm)

NAME

       Bio::Align::PairwiseStatistics - Base statistic object for Pairwise Alignments

SYNOPSIS

	 use strict;
	 my $stats = Bio::Align::PairwiseStatistics->new();

	 # get alignment object of two sequences somehow
	 my $pwaln;
	 print $stats->number_of_comparable_bases($pwaln);
	 my $score = $stats->score_nuc($pwaln);

DESCRIPTION

       Calculate pairwise statistics.

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
       web:

	 https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Jason Stajich
       Email jason-at-bioperl-dot-org

APPENDIX

       The rest of the documentation details each of the object methods.  Internal methods are usually preceded with a _

   number_of_comparable_bases
	Title	: number_of_comparable_bases
	Usage	: my $bases = $stat->number_of_comparable_bases($aln);
	Function: Returns the count of the number of bases that can be
		  compared (L) in this alignment ( length - gaps)
	Returns : integer
	Args	: L<Bio::Align::AlignI>

   number_of_differences
	Title	: number_of_differences
	Usage	: my $nd = $stat->number_of_distances($aln);
	Function: Returns the number of differences between two sequences
	Returns : integer
	Args	: L<Bio::Align::AlignI>

   number_of_gaps
	Title	: number_of_gaps
	Usage	: my $nd = $stat->number_of_gaps($aln);
	Function: Returns the number of gapped positions among sequences in alignment
	Returns : integer
	Args	: L<Bio::Align::AlignI>

   score_nuc
	Title	: score_nuc
	Usage	: my $score = $stat->score_nuc($aln);
		    or
		  my $score = $stat->score_nuc(
		    -aln =>$aln,
		    -match    => 1,
		    -mismatch => -1,
		    -gap_open => -1,
		    -gap_ext  => -1
		  );
	Function: Calculate the score of an alignment of 2 nucleic acid sequences. The
		  scoring parameters can be specified. Otherwise the blastn default
		  parameters are used: match = 2, mismatch = -3, gap opening = -5, gap
		  extension = -2
	Returns : alignment score (number)
	Args	: L<Bio::Align::AlignI>
		  match score [optional]
		  mismatch score [optional]
		  gap opening score [optional]
		  gap extension score [optional]

perl v5.14.2							    2012-03-02				       Bio::Align::PairwiseStatistics(3pm)

HP-UX