Rocks clusters make sense for educational environments


 
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Special Forums UNIX and Linux Applications High Performance Computing Rocks clusters make sense for educational environments
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Old 08-18-2008
Rocks clusters make sense for educational environments

08-18-2008 11:00 AM
Cluster computing has played a pivotal role in the way research is conducted in educational environments. Because the amount of available money and hardware varies between university researchers, often it's necessary to find a clustering solution that can work well on a small scale, but also can be expanded into a large computing cluster. To maximize grants, researchers typically ask for an open source solution to meet their needs. Despite the lack of certain desirable features, Rocks clusters are among the best open source solution for building a computing cluster.



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CLUSTER(1)						      General Commands Manual							CLUSTER(1)

NAME
cluster - find clusters in a graph and augment the graph with this information. SYNOPSIS
cluster [-v?] [ -Ck ] [ -ck ] [ -o outfile ] [ files ] DESCRIPTION
cluster takes as input a graph in DOT format, finds node clusters and augments the graph with this information. The clusters are specified by the "cluster" attribute attached to nodes; cluster values are non-negative integers. cluster attempts to maximize the modularity of the clustering. If the edge attribute "weight" is defined, this will be used in computing the clustering. OPTIONS
The following options are supported: -Ck specifies a targeted number of clusters that should be generated. The specified number k is only a suggestion and may not be real- isable. If k == 0, the default, the number of clusters that approximately optimizes the modularity is returned. -ck specifies clustering method. If k == 0, the default, the modularity will be used. If k == 1 modularity quality will be used. -ooutfile Specifies that output should go into the file outfile. By default, stdout is used. -v Verbose mode. EXAMPLES
Applying cluster to the following graph, graph { 1--2 [weight=10.] 2--3 [weight=1] 3--4 [weight=10.] 4--5 [weight=10] 5--6 [weight=10] 3--6 [weight=0.1] 4--6 [weight=10.] } gives graph { node [cluster="-1"]; 1 [cluster=1]; 2 [cluster=1]; 3 [cluster=2]; 4 [cluster=2]; 5 [cluster=2]; 6 [cluster=2]; 1 -- 2 [weight="10."]; 2 -- 3 [weight=1]; 3 -- 4 [weight="10."]; 4 -- 5 [weight=10]; 5 -- 6 [weight=10]; 3 -- 6 [weight="0.1"]; 4 -- 6 [weight="10."]; } AUTHOR
Yifan Hu <yifanhu@research.att.com> SEE ALSO
gvmap(1) Blondel, V.D., Guillaume, J.L., Lambiotte, R., Lefebvre, E.: Fast unfolding of communities in large networks. Journal of Statistical Mechanics: Theory and Experiment (2008), P10008. 3 March 2011 CLUSTER(1)