10-14-2005
Is that the only way.. I don't think so. There should be some way out.
Bala
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LEARN ABOUT DEBIAN
bio::map::linkageposition
Bio::Map::LinkagePosition(3pm) User Contributed Perl Documentation Bio::Map::LinkagePosition(3pm)
NAME
Bio::Map::LinkagePosition - Create a Position for a Marker that will be placed on a Bio::Map::LinkageMap
SYNOPSIS
use Bio::Map::Position;
my $position = Bio::Map::LinkagePosition->new(-positions => 1,
-distance => 22.1 );
# can get listing of positions
my @positions = $position->each_position;
DESCRIPTION
Position for a Bio::Map::MarkerI compliant object that will be placed on a Bio::Map::LinkageMap. See Bio::Map::MarkerI and
Bio::Map::LinkageMap for details
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Chad Matsalla
Email bioinformatics1@dieselwurks.com
CONTRIBUTORS
Lincoln Stein, lstein@cshl.org Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Jason Stajich jason@bioperl.org Sendu Bala bix@sendu.me.uk
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::Map::LinkagePosition->new(-positions => $position,
-distance => $distance);
Function: Builds a new Bio::Map::LinkagePosition object
Returns : Bio::Map::LinkagePosition
Args : -order => the relative order of this marker on a linkage map
-positions => positions on a map
Bio::Map::PositionI methods
order
Title : order
Usage : $o_position->order($order)
my $order = $o_position->order()
Function: get/set the order position of this position in a map
Returns : int
Args : none to get, int to set
perl v5.14.2 2012-03-02 Bio::Map::LinkagePosition(3pm)