06-11-2005
Quote:
Originally Posted by d11wtq
Generally you can type
top
in a shell command line to see an overview of the system resources various processes are using. Hit the "q" key to exit the program again.
Good luck.
That is by no means available on all flavours of unix, for example Solaris does not by default include top.
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LEARN ABOUT DEBIAN
bio::search::hit::hitfactory
Bio::Search::Hit::HitFactory(3pm) User Contributed Perl Documentation Bio::Search::Hit::HitFactory(3pm)
NAME
Bio::Search::Hit::HitFactory - A factory to create Bio::Search::Hit::HitI objects
SYNOPSIS
use Bio::Search::Hit::HitFactory;
my $factory = Bio::Search::Hit::HitFactory->new();
my $resultobj = $factory->create(@args);
DESCRIPTION
This is a general way of hiding the object creation process so that we can dynamically change the objects that are created by the SearchIO
parser depending on what format report we are parsing.
This object is for creating new Hits.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
web:
https://redmine.open-bio.org/projects/bioperl/
AUTHOR - Jason Stajich
Email jason@bioperl.org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new
Usage : my $obj = Bio::Search::Hit::HitFactory->new();
Function: Builds a new Bio::Search::Hit::HitFactory object
Returns : Bio::Search::Hit::HitFactory
Args :
create
Title : create
Usage : $factory->create(%args)
Function: Create a new L<Bio::Search::Hit::HitI> object
Returns : L<Bio::Search::Hit::HitI>
Args : hash of initialization parameters
type
Title : type
Usage : $factory->type('Bio::Search::Hit::GenericHit');
Function: Get/Set the Hit creation type
Returns : string
Args : [optional] string to set
perl v5.14.2 2012-03-02 Bio::Search::Hit::HitFactory(3pm)