Sponsored Content
Top Forums UNIX for Beginners Questions & Answers Normalize text field or sort values Post 303045956 by shepsol1 on Sunday 19th of April 2020 06:35:06 PM
Old 04-19-2020
Normalize text field or sort values

Hello so I am trying to "normalize" data so that it will upload correctly into a postgreql db.
The problem I am running into is that I formatted my db to injest the data in the order of which it is normalized.
However in certain data sets several fields of information are not available, so when I normalize those with my script it gets thrown off, and the values are not injested into the correct column in the DB.
So the options I have are
1. when I normalize the information, sort it so the first fields are the ones that are always present or
2. When i normalize the information insert the ,, for the missing fields in order to keep everything in the correct column.
Either way I have no idea how to do this and would appreciate any suggestions.
THANK YOU SO MUCH FOR YOUR TIME

Last edited by vbe; 04-20-2020 at 03:06 AM..
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

How to sort a field in a file having date values

Hi All, I am having a pipe delimited file .In this file the 3rd column is having date values.I need to get the min date and max date from that file. I have used cut -d '|' test.dat -f 3|sort -u But it is not sorting the date .How to sort the date column using unix commands Thanks ... (4 Replies)
Discussion started by: risshanth
4 Replies

2. Shell Programming and Scripting

Find top N values for field X based on field Y's value

I want to find the top N entries for a certain field based on the values of another field. For example if N=3, we want the 3 best values for each entry: Entry1 ||| 100 Entry1 ||| 95 Entry1 ||| 30 Entry1 ||| 80 Entry1 ||| 50 Entry2 ||| 40 Entry2 ||| 20 Entry2 ||| 10 Entry2 ||| 50... (1 Reply)
Discussion started by: FrancoisCN
1 Replies

3. Shell Programming and Scripting

Sort alpha on 1st field, numerical on 2nd field (sci notation)

I want to sort alphabetically on the first field and sort in descending numerical order on the 2nd field. With a normal "sort -r -n" it does this: abc ||| 5e-05 ||| bla abc ||| 3 ||| ble def ||| 1 ||| abc def ||| 0.2 ||| def As you can see it ignores the fact that 5e-05 is actually 0.00005... (1 Reply)
Discussion started by: FrancoisCN
1 Replies

4. Shell Programming and Scripting

adding field values if field matches

hi i have file as below , i want to add duplicate records like bell_bb to one record with valuve as 15 ( addition of both ) any oneline awk script to achive this ? header 0 CAMPAIGN_NAME 1 Bell_BB 14 Bell_MONTHLY 803 SOLO_UNBEATABLE 644 Bell_BB 1 Bell_MONTHLY 25 SOLO_UNBEATABLE... (4 Replies)
Discussion started by: raghavendra.cse
4 Replies

5. Shell Programming and Scripting

awk, comma as field separator and text inside double quotes as a field.

Hi, all I need to get fields in a line that are separated by commas, some of the fields are enclosed with double quotes, and they are supposed to be treated as a single field even if there are commas inside the quotes. sample input: for this line, 5 fields are supposed to be extracted, they... (8 Replies)
Discussion started by: kevintse
8 Replies

6. Shell Programming and Scripting

Awk Search text string in field, not all in field.

Hello, I am using awk to match text in a tab separated field and am able to do so when matching the exact word. My problem is that I would like to match any sequence of text in the tab-separated field without having to match it all. Any help will be appreciated. Please see the code below. awk... (3 Replies)
Discussion started by: rocket_dog
3 Replies

7. Shell Programming and Scripting

Read record from the text file contain multiple separated values & assign those values to variables

I have a file containing multiple values, some of them are pipe separated which are to be read as separate values and some of them are single value all are these need to store in variables. I need to read this file which is an input to my script Config.txt file name, first path, second... (7 Replies)
Discussion started by: ketanraut
7 Replies

8. Shell Programming and Scripting

Sort file by field 1 that has text as well as a number

I am using the below awk that results in the below output: awk '{k=$1 OFS $2; s+=$4; c++} END{for(i in s) print i, s/c}' input.txt > output.txt output.txt chr20:43625799-43625957 STK4:exon.6;STK4:exon.7 310.703 chr20:36770455-36770611 TGM2:exon.6;TGM2:exon.7 614.756... (5 Replies)
Discussion started by: cmccabe
5 Replies

9. Shell Programming and Scripting

awk to parse field and include the text of 1 pipe in field 4

I am trying to parse the input in awk to include the |gc= in $4 but am not able to. The below is close: awk so far: awk '{sub(/\|]+]++/, ""); print }' input.txt Input chr1 955543 955763 AGRN-6|pr=2|gc=75 0 + chr1 957571 957852 AGRN-7|pr=3|gc=61.2 0 + chr1 970621 ... (7 Replies)
Discussion started by: cmccabe
7 Replies

10. UNIX for Beginners Questions & Answers

awk GSUB read field values from multiple text files

My program run without error. The problem I am having. The program isn't outputting field values with the column headers to file.txt. Each of the column headers in file.txt has no data. MEMSIZE SECOND SASFoundation Filename The output results in file.txt should show: ... (1 Reply)
Discussion started by: dellanicholson
1 Replies
Fields(3pm)						User Contributed Perl Documentation					       Fields(3pm)

NAME
Sort::Fields - Sort lines containing delimited fields SYNOPSIS
use Sort::Fields; @sorted = fieldsort [3, '2n'], @lines; @sorted = fieldsort '+', [-1, -3, 0], @lines; $sort_3_2n = make_fieldsort [3, '2n'], @lines; @sorted = $sort_3_2n->(@lines); DESCRIPTION
Sort::Fields provides a general purpose technique for efficiently sorting lists of lines that contain data separated into fields. Sort::Fields automatically imports two subroutines, "fieldsort" and "make_fieldsort", and two variants, "stable_fieldsort" and "make_sta- ble_fieldsort". "make_fieldsort" generates a sorting subroutine and returns a reference to it. "fieldsort" is a wrapper for the "make_fieldsort" subroutine. The first argument to make_fieldsort is a delimiter string, which is used as a regular expression argument for a "split" operator. The delimiter string is optional. If it is not supplied, make_fieldsort splits each line using "/s+/". The second argument is an array reference containing one or more field specifiers. The specifiers indicate what fields in the strings will be used to sort the data. The specifier "1" indicates the first field, "2" indicates the second, and so on. A negative specifier like "-2" means to sort on the second field in reverse (descending) order. To indicate a numeric rather than alphabetic comparison, append "n" to the specifier. A specifier of "0" means the entire string ("-0" means the entire string, in reverse order). The order in which the specifiers appear is the order in which they will be used to sort the data. The primary key is first, the secondary key is second, and so on. "fieldsort [1, 2], @data" is roughly equivalent to "make_fieldsort([1, 2])->(@data)". Avoid calling fieldsort repeatedly with the same sort specifiers. If you need to use a particular sort more than once, it is more efficient to call "make_fieldsort" once and reuse the subroutine it returns. "stable_fieldsort" and "make_stable_fieldsort" are like their "unstable" counterparts, except that the items that compare the same are maintained in their original order. EXAMPLES
Some sample data (in array @data): 123 asd 1.22 asdd 32 ewq 2.32 asdd 43 rewq 2.12 ewet 51 erwt 34.2 ewet 23 erww 4.21 ewet 91 fdgs 3.43 ewet 123 refs 3.22 asdd 123 refs 4.32 asdd # alpha sort on column 1 print fieldsort [1], @data; 123 asd 1.22 asdd 123 refs 3.22 asdd 123 refs 4.32 asdd 23 erww 4.21 ewet 32 ewq 2.32 asdd 43 rewq 2.12 ewet 51 erwt 34.2 ewet 91 fdgs 3.43 ewet # numeric sort on column 1 print fieldsort ['1n'], @data; 23 erww 4.21 ewet 32 ewq 2.32 asdd 43 rewq 2.12 ewet 51 erwt 34.2 ewet 91 fdgs 3.43 ewet 123 asd 1.22 asdd 123 refs 3.22 asdd 123 refs 4.32 asdd # reverse numeric sort on column 1 print fieldsort ['-1n'], @data; 123 asd 1.22 asdd 123 refs 3.22 asdd 123 refs 4.32 asdd 91 fdgs 3.43 ewet 51 erwt 34.2 ewet 43 rewq 2.12 ewet 32 ewq 2.32 asdd 23 erww 4.21 ewet # alpha sort on column 2, then alpha on entire line print fieldsort [2, 0], @data; 123 asd 1.22 asdd 51 erwt 34.2 ewet 23 erww 4.21 ewet 32 ewq 2.32 asdd 91 fdgs 3.43 ewet 123 refs 3.22 asdd 123 refs 4.32 asdd 43 rewq 2.12 ewet # alpha sort on column 4, then numeric on column 1, then reverse # numeric on column 3 print fieldsort [4, '1n', '-3n'], @data; 32 ewq 2.32 asdd 123 refs 4.32 asdd 123 refs 3.22 asdd 123 asd 1.22 asdd 23 erww 4.21 ewet 43 rewq 2.12 ewet 51 erwt 34.2 ewet 91 fdgs 3.43 ewet # now, splitting on either literal period or whitespace # sort numeric on column 4 (fractional part of decimals) then # numeric on column 3 (whole part of decimals) print fieldsort '(?:.|s+)', ['4n', '3n'], @data; 51 erwt 34.2 ewet 43 rewq 2.12 ewet 23 erww 4.21 ewet 123 asd 1.22 asdd 123 refs 3.22 asdd 32 ewq 2.32 asdd 123 refs 4.32 asdd 91 fdgs 3.43 ewet # alpha sort on column 4, then numeric on the entire line # NOTE: produces warnings under -w print fieldsort [4, '0n'], @data; 32 ewq 2.32 asdd 123 asd 1.22 asdd 123 refs 3.22 asdd 123 refs 4.32 asdd 23 erww 4.21 ewet 43 rewq 2.12 ewet 51 erwt 34.2 ewet 91 fdgs 3.43 ewet # stable alpha sort on column 4 (maintains original relative order # among items that compare the same) print stable_fieldsort [4], @data; 123 asd 1.22 asdd 32 ewq 2.32 asdd 123 refs 3.22 asdd 123 refs 4.32 asdd 43 rewq 2.12 ewet 51 erwt 34.2 ewet 23 erww 4.21 ewet 91 fdgs 3.43 ewet BUGS
Some rudimentary tests now. Perhaps something should be done to catch things like: fieldsort '.', [1, 2], @lines; '.' translates to "split /./" -- probably not what you want. Passing blank lines and/or lines containing the wrong kind of data (alphas instead of numbers) can result in copious warning messages under "-w". If the regexp contains memory parentheses ("(...)" rather than "(?:...)"), split will function in "delimiter retention" mode, capturing the contents of the parentheses as well as the stuff between the delimiters. I could imagine how this could be useful, but on the other hand I could also imagine how it could be confusing if encountered unexpectedly. Caveat sortor. Not really a bug, but if you are planning to sort a large text file, consider using sort(1). Unless, of course, your operating system doesn't have sort(1). AUTHOR
Joseph N. Hall, joseph@5sigma.com SEE ALSO
perl(1). perl v5.8.8 2008-03-25 Fields(3pm)
All times are GMT -4. The time now is 06:49 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy